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[WIP] Major refactorization #113

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MartinuzziFrancesco merged 70 commits intomasterSciML/ReservoirComputing.jl:masterfrom refacSciML/ReservoirComputing.jl:refacCopy head branch name to clipboardMay 2, 2022

+3,258-4,771

Commits

Commits on Oct 14, 2021

• start of refac

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  440e4bc

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Commits on Oct 15, 2021

• added AbstractReservoir, AbstractInputLayer types, major refac around it

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Commits on Oct 16, 2021

• refac training, added reservoir_drivers, future work in todo dir

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Commits on Oct 17, 2021

• mwe is running on refac

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Commits on Oct 18, 2021

• final refac, start of tests

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Commits on Oct 19, 2021

• Direct() implementation, changing next_state

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• mwe working on final refac. starting tests on linear training

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• linear regressions working. stable state of the minimal code

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Commits on Oct 20, 2021

• started gaussian regression training

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Commits on Oct 21, 2021

• some other refac, gaussian training works. on to gaussian prediction

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• refac of output layer and prediction. mwe working here

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• gaussian training and prediction working

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• added support vector regression

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Commits on Oct 22, 2021

• finished all the input layers inplementations

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Commits on Oct 23, 2021

• added Fitted()

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Commits on Oct 26, 2021

• adding hybrid states, missing prediction

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Commits on Oct 30, 2021

• reverted back to extended_states, added Hybrid variation. test todo

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  e3c0228

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• added esn input layers docs, fixed some Hybrid issues. Missing esn_predict refac for Hybrid esn

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Commits on Oct 31, 2021

• fixed minor errors, mwe working

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Commits on Nov 2, 2021

• added Hybrid variation, training and prediction. mwe working

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Commits on Nov 5, 2021

• start of the work on gru esn

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• added NullLayer and NullReservoir, cleaning up the gru esn implementation

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Commits on Nov 7, 2021

• gru esn fixes. mwe working. missing minimal gru

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• small fixes, added Minimal gru. mwe working

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Commits on Nov 9, 2021

• small fixes, starting to add reca

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Commits on Nov 23, 2021

• minor fixes, added reca training, mwe working

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  f22916b

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Commits on Nov 29, 2021

• major cleanup of predictions, added states types

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Commits on Nov 30, 2021

• fixes to hybrid esn

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  1716819

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• reca cleanup, adding prediction

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  21a14f6

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Commits on Dec 1, 2021

• finished reca predict (tested on Predictive)

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  790bef0

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• updated readme

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  494bf2c

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• clean up readme

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  a8213f3

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• general cleanup

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Commits on Dec 3, 2021

• added states tests esn

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Commits on Dec 4, 2021

• more tests, small fixes

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  a3fdd51

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Commits on Dec 5, 2021

• split rnn and mrnn, finished up tests

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• updated project

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• run on v1.6

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  fc603b5

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• fix CI

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  ab12556

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• Merge branch 'master' into refac

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Commits on Dec 6, 2021

• more tests, docs. Finished index

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• more tests, docs. Finished index

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  1c32fbf

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Commits on Dec 7, 2021

• bulk of API docs, some cleanup

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• final api docs

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Commits on Dec 8, 2021

• basic lorenz example, documentation layout

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  1a4e5e0

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Commits on Feb 1, 2022

• major docs addition, minor code tweaks

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Commits on Feb 2, 2022

• Streamlined documentation, added logo

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Commits on Feb 4, 2022

• small variations to the gru

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Commits on Feb 9, 2022

• Changed reservoir APIs

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Commits on Feb 10, 2022

• Small corrections

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Commits on Feb 16, 2022

• Fixed padding, added washout, added reca and mackeyglass docs

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  11aa834

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• added GRU docs

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Commits on Feb 28, 2022

• Hybrid docs

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Commits on Mar 13, 2022

• update readme

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Commits on Mar 14, 2022

• added deep esn, docs and tests

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Commits on Apr 20, 2022

• less allocations, gpu extension

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• less allocations, gpu extension

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• added citations

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• Merge branch 'master' into refac

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Commits on Apr 21, 2022

• minor fix

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• other minor fixes

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  7f1b7e3

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Commits on May 2, 2022

• updated Minimal GRU

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• updated Minimal GRU, removed comments

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  fd90d44

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• Merge branch 'master' into refac

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  d87caa7

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• fixed dimensions

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  f88a56b

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• more tests

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• cleanup

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• even more tests

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• readme cleanup

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• version bump

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