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feat: allow parameters to be unknowns in the initialization system #2928

Merged
merged 19 commits into from
Oct 10, 2024
Merged

feat: allow parameters to be unknowns in the initialization system #2928

merged 19 commits into from
Oct 10, 2024

Commits on Oct 10, 2024

  1. feat: allow parameters to be unknowns in the initialization system

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  2. feat: collect guesses from parameter metadata in ODESystem

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  3. test: test parameters as initialization unknowns

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  4. fix: check symbolic_type in namespace_expr

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  5. refactor: allow parameter default to be missing in @mtkmodel

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  6. feat: support SciMLBase.remake_initializeprob

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  7. test: test remaking of initialization problem

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  8. fix: handle edge cases in namespacing

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  9. fix: allow passing nothing to override default for @mtkmodel models

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  10. fix: fix nothing default overrides being ignored

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  11. feat: track parameter dependency defaults and guesses

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  12. fix: handle type promotion in InitializationProblem with observed

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  13. fix: improve type promotion in remake_initializeprob

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  14. feat: preserve the u0map passed to ODEProblem and use it in `rema… 

    …ke_initializeprob`
    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  15. feat: validate parameter type and allow dependent initial values in p… 

    …aram init
    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  16. fix: only allow numeric pdeps to be initialization equations

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  17. feat: allow nothing to override retained values in `remake_initiali… 

    …zeprob`
    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  18. docs: document parameter initialization in the tutorial

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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  19. build: bump compats for SciMLBase, DiffEqBase, OrdinaryDiffEqCore

    @AayushSabharwal
    AayushSabharwal committed Oct 10, 2024
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