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6676 port generative networks spade (#7320)
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Towards #6676  .

### Description

This adds SPADE-enabled autoencoder and diffusion_model_unet
architectures. They are new implementations for each network, rather
than options in the existing network, because @virginiafdez and I felt
that adding additional options to the existing networks to enable spade
compatibility significantly reduced the readability of them for users
who were not interested in SPADE functionality.

These are the last networks to be ported over.

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not
applicable items -->
- [x] Non-breaking change (fix or new feature that would not break
existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing
functionality to change).
- [x] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u
--net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick
--unittests --disttests`.
- [x] In-line docstrings updated.
- [x] Documentation updated, tested `make html` command in the `docs/`
folder.

---------

Signed-off-by: Mark Graham <markgraham539@gmail.com>
Signed-off-by: Mark Graham <mark@Marks-MacBook-Pro.local>
Co-authored-by: YunLiu <55491388+KumoLiu@users.noreply.github.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
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3 people authored Dec 19, 2023
1 parent b85a534 commit aa4a4db
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14 changes: 14 additions & 0 deletions docs/source/networks.rst
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Expand Up @@ -258,6 +258,10 @@ N-Dim Fourier Transform
.. autofunction:: monai.networks.blocks.fft_utils_t.fftshift
.. autofunction:: monai.networks.blocks.fft_utils_t.ifftshift

`SPADE`
~~~~~~~
.. autoclass:: monai.networks.blocks.spade_norm.SPADE
:members:

Layers
------
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.. autoclass:: DiffusionModelUNet
:members:

`SPADEDiffusionModelUNet`
~~~~~~~~~~~~~~~~~~~~~~~~~
.. autoclass:: SPADEDiffusionModelUNet
:members:

`ControlNet`
~~~~~~~~~~~~
.. autoclass:: ControlNet
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.. autoclass:: AutoencoderKL
:members:

`SPADEAutoencoderKL`
~~~~~~~~~~~~~~~~~~~~
.. autoclass:: SPADEAutoencoderKL
:members:

`VarAutoEncoder`
~~~~~~~~~~~~~~~~
.. autoclass:: VarAutoEncoder
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1 change: 1 addition & 0 deletions monai/networks/blocks/__init__.py
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Expand Up @@ -30,6 +30,7 @@
from .regunet_block import RegistrationDownSampleBlock, RegistrationExtractionBlock, RegistrationResidualConvBlock
from .segresnet_block import ResBlock
from .selfattention import SABlock
from .spade_norm import SPADE
from .squeeze_and_excitation import (
ChannelSELayer,
ResidualSELayer,
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96 changes: 96 additions & 0 deletions monai/networks/blocks/spade_norm.py
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@@ -0,0 +1,96 @@
# Copyright (c) MONAI Consortium
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
# http://www.apache.org/licenses/LICENSE-2.0
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

from __future__ import annotations

import torch
import torch.nn as nn
import torch.nn.functional as F

from monai.networks.blocks import ADN, Convolution


class SPADE(nn.Module):
"""
Spatially Adaptive Normalization (SPADE) block, allowing for normalization of activations conditioned on a
semantic map. This block is used in SPADE-based image-to-image translation models, as described in
Semantic Image Synthesis with Spatially-Adaptive Normalization (https://arxiv.org/abs/1903.07291).
Args:
label_nc: number of semantic labels
norm_nc: number of output channels
kernel_size: kernel size
spatial_dims: number of spatial dimensions
hidden_channels: number of channels in the intermediate gamma and beta layers
norm: type of base normalisation used before applying the SPADE normalisation
norm_params: parameters for the base normalisation
"""

def __init__(
self,
label_nc: int,
norm_nc: int,
kernel_size: int = 3,
spatial_dims: int = 2,
hidden_channels: int = 64,
norm: str | tuple = "INSTANCE",
norm_params: dict | None = None,
) -> None:
super().__init__()

if norm_params is None:
norm_params = {}
if len(norm_params) != 0:
norm = (norm, norm_params)
self.param_free_norm = ADN(
act=None, dropout=0.0, norm=norm, norm_dim=spatial_dims, ordering="N", in_channels=norm_nc
)
self.mlp_shared = Convolution(
spatial_dims=spatial_dims,
in_channels=label_nc,
out_channels=hidden_channels,
kernel_size=kernel_size,
norm=None,
act="LEAKYRELU",
)
self.mlp_gamma = Convolution(
spatial_dims=spatial_dims,
in_channels=hidden_channels,
out_channels=norm_nc,
kernel_size=kernel_size,
act=None,
)
self.mlp_beta = Convolution(
spatial_dims=spatial_dims,
in_channels=hidden_channels,
out_channels=norm_nc,
kernel_size=kernel_size,
act=None,
)

def forward(self, x: torch.Tensor, segmap: torch.Tensor) -> torch.Tensor:
"""
Args:
x: input tensor with shape (B, C, [spatial-dimensions]) where C is the number of semantic channels.
segmap: input segmentation map (B, C, [spatial-dimensions]) where C is the number of semantic channels.
The map will be interpolated to the dimension of x internally.
"""

# Part 1. generate parameter-free normalized activations
normalized = self.param_free_norm(x)

# Part 2. produce scaling and bias conditioned on semantic map
segmap = F.interpolate(segmap, size=x.size()[2:], mode="nearest")
actv = self.mlp_shared(segmap)
gamma = self.mlp_gamma(actv)
beta = self.mlp_beta(actv)
out: torch.Tensor = normalized * (1 + gamma) + beta
return out
2 changes: 2 additions & 0 deletions monai/networks/nets/__init__.py
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Expand Up @@ -106,6 +106,8 @@
seresnext50,
seresnext101,
)
from .spade_autoencoderkl import SPADEAutoencoderKL
from .spade_diffusion_model_unet import SPADEDiffusionModelUNet
from .swin_unetr import PatchMerging, PatchMergingV2, SwinUNETR
from .torchvision_fc import TorchVisionFCModel
from .transchex import BertAttention, BertMixedLayer, BertOutput, BertPreTrainedModel, MultiModal, Pooler, Transchex
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