Skip to content

Commit

Permalink
update news.md from pull #105 to #120
Browse files Browse the repository at this point in the history
  • Loading branch information
andybeet committed Aug 26, 2021
1 parent 1b04e1a commit f1189ae
Showing 1 changed file with 123 additions and 0 deletions.
123 changes: 123 additions & 0 deletions news.md
Original file line number Diff line number Diff line change
Expand Up @@ -4,6 +4,129 @@

## Bug Fixes (patch)

# neus-atlantis 1.0.0-9052 (in dev)
(built with altantis rev 6536)

ZM Spatial Patterns (issue: ZM depletion regionally)

* All groups persisting (besides nutrient/detritus/macro-algae)
* All but STB and SDF stable
* Fixed issues with regional depletion in ZM
* mum, C, FSP, mQ changes to planktivores.
* Added seasonal movements to ZM similar to existing ZL

As described in [#120](https://github.com/NOAA-EDAB/neus-atlantis/pull/120)

# neus-atlantis 1.0.0-9051 (in dev)
(built with altantis rev 6536)

Benthic & Zooplankton Rebalancing

* Decrease initial HER biomass
* Reduce biomass of LSQ, ISQ, OSH, NSH, BG, BD, BO
* More stable ZL and ZM timeseries
* Attempts to get flatter HER, MAK, MEN, and BUT timeseries (not completely successful)

As described in [#118](https://github.com/NOAA-EDAB/neus-atlantis/pull/118)

# neus-atlantis 1.0.0-9050 (in dev)
(built with altantis rev 6536)

Rebalance and Stability.

* General tuning of all groups not passing calibration criteria after changes to phytoplankton forcing. Started with focus on reaching stability with zooplankton, then planktivores, then rest.

* Reverted HERinitial conditions back to stock SMART levels
* Tuning of C, mum, mQ for Benthos, Demersals and Zoo


As described in [#117](https://github.com/NOAA-EDAB/neus-atlantis/pull/117)

# neus-atlantis 1.0.0-9049 (in dev)
(built with altantis rev 6536)

Updated phytoplankton (PL, PS, DF) forcing files to accurately convert from Chlorophyll. Established zooplankton and planktivore persistence.

As described in [#114](https://github.com/NOAA-EDAB/neus-atlantis/pull/114)


# neus-atlantis 1.0.0-9048 (in dev)
(built with altantis rev 6536)

Chlorophyll to Nitrogen ratio changed from 7 to 1/7.

* New forcing files generated.
* Preliminary adjustments to biology.prm to get model to complete run. Needs further tuning.

As described in [#111](https://github.com/NOAA-EDAB/neus-atlantis/pull/111)



# neus-atlantis 1.0.0-9047 (in dev)
(built with altantis rev 6536)

Age structure fixes for WIF, SUF, RHK, POL, STB.
Stable and persisting, with good age structures.

* changes to c mum, FSP, mQ


As described in [#109](https://github.com/NOAA-EDAB/neus-atlantis/pull/109) + [#110](https://github.com/NOAA-EDAB/neus-atlantis/pull/110)




# neus-atlantis 1.0.0-9046 (in dev)
(built with altantis rev 6536)

Improve Stability of REP, COD, CLA. (Remaining are other bivalves, WIF, and TAU.)

* growth rates, mortality, reduced dominant predators on TAU and WIF.

As described in [#108](https://github.com/NOAA-EDAB/neus-atlantis/pull/108)


# neus-atlantis 1.0.0-9045 (in dev)
(built with altantis rev 6536)

All persist, but not at "reasonable" levels

* Initial conditions changes and additional mum/C/mQ changes for MAK, WHK, BLF, MPF, BPF, FDE, and COD.
* Decreased FSP_BLF.
* Increased KDENR_BPF

As described in [#107](https://github.com/NOAA-EDAB/neus-atlantis/pull/107)



# neus-atlantis 1.0.0-9044 (in dev)
(built with altantis rev 6536)

Persistence of fish group GOO, COD, BUT, BLF, WHK

* Increase mum and C.
* Bracketed FSP based on mum and C

All pass persistence, only FDE doesnt persist

As described in [#106](https://github.com/NOAA-EDAB/neus-atlantis/pull/106)



# neus-atlantis 1.0.0-9043 (in dev)
(built with altantis rev 6536)

Improves shellfish persistence of SCA, QHG, CLA, and LOB.

* Reduces DOG, LSK, and BC growth.
* Increase LOB growth.
* Increased CLA, SCA, and QHG clearance rates.

Passes persistence, but not stability/reasonability

As described in [#105](https://github.com/NOAA-EDAB/neus-atlantis/pull/105)



# neus-atlantis 1.0.0-9042 (in dev)
(built with altantis rev 6536)
Expand Down

0 comments on commit f1189ae

Please sign in to comment.