Develop → master merge for v1.4.1 #682
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Update compathelper CI script
Finally add DocStringExtensions 🥳
Fix pFBA issue with return type nothing
Add some constructors
add an explanation of what happens when you gapfill a feasible model
Add SBO terms
Currently this requires a #dev version of Clarabel
…22-09-10-02-40-32-218-02454686738 CompatHelper: bump compat for SBML to 1, (keep existing compat)
use Clarabel instd of OSQP
- support CVTerms-based annotations in the usual way (thanks COBRApy for inspiration!) - fix minor issues with notes and formula export - prevent problems when exporting (some) non-SBMLizable metabolite names
(I need to depend on the fixes here)
Make the SBML annotations work just like with JSON models
docs: reflect the solver change in Project.toml
fix docbuild: JuMP `MIN_SENSE` and `MAX_SENSE` disappeared
remove `polish` parameter specific to osqp
Codecov ReportBase: 90.43% // Head: 90.60% // Increases project coverage by
Additional details and impacted files@@ Coverage Diff @@
## master #682 +/- ##
==========================================
+ Coverage 90.43% 90.60% +0.16%
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Files 79 82 +3
Lines 1923 2149 +226
==========================================
+ Hits 1739 1947 +208
- Misses 184 202 +18
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backmerge `master` changes to `develop` to resolve merge conflicts
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