First attempt at converting the OpenOffice side panel

* upstream/master:
  Completely rework save operation (#4309)

add edit function
implement rest of logic

load last selected style
subscribe preview panel to changes

wrap preview panel in vbox

rework manual connect
rework settings popup
initialize oo prefs to avoid NPE
remove old style dialog

fix preference storage
fix manual path select

todo: find out how to change the values

fix passing of prefs
fix advanced cite dialog

* upstream/master:
  Update Libraries (#4366)
  ArXiv fetcher support http url (#4367)
  Fix issue 3861 : XMP Dialog, Add new Groups dialog, Append Library dialog to javafx (#4264)
  fix IndexOutOfBoundsException when saving preferences
  group RadioButtons in ExportSortingPrefsTab to prevent the selection of multiple or no order types
  Convert Part of the Issue#3861 Quality->Cleanup entries (#4268)
  UPDATE gradle to 4.10.2 (#4358)
  Completed General Fields Customizer conversion to JavaFX (#4346)
  Fix JavaFX thread exception when fetching new infos (#4354)
  Auto trim url field (#4355)
  Fix freezes in entry editor (#4351)

# Conflicts:
#	src/main/java/org/jabref/preferences/PreferencesService.java

add some dialog basics for manage citatiosn

* upstream/master: (30 commits)
  Update README.md (#4419)
  Fix generate bibtex key overwrite warning dialog (#4418)
  Fix group hit counter when adding entries (#4413)
  Update README.md
  fix java.nio.file.FileSystemNotFoundException and reorganize code (#4416)
  fixed an issue where corresponding groups are sometimes not highlighted when clicking on entries (#4404)
  Add a few journal abbreviations (#4412)
  Fix display of radio buttons (#4411)
  Update issue templates
  Delete ISSUE_TEMPLATE.md
  Update issue templates
  Integrate mrdlib redesign (#4361)
  fix "save" button in preference dialog not response (#4406)
  show dialog before creating entry (#4405)
  Scrollbar invisible in Preferences -> BibTex Key Pattern (#4287) (#4398)
  Updates (#4402)
  Fixes for all mods exporter tests (#4396)
  Fix EntryType dialog not closed after generate button (#4390)
  Make rank image narrower (#4395)
  Fix showing multiple icons for one menu entry - fixes #4384 (#4392)
  ...

* upstream/master:
  New Crowdin translations (#4454)
  Fix error in l10n file: Toogle -> Toggle (#4453)
  Remove depandabot
  Bump junit-pioneer from 0.2.2 to 0.3.0 (#4451)
  Add Depandabot badge
  Emphasize that users should try out the newest version before reporting a bug
  Add a preference to add files in entry editor (#4408)
  Add submodule pull to circle ci and fix theme loading css (#4443)
  fix groups drag and drop (#4439)
  Convert merge entries dialog to JavaFX (#4410)
  Fix ArrayIndexOutOfBoundsException on second pdf import (#4426)
  Fix radiobuttons in preference menu (#4409)
  Add citation styles as git submodule (#4431)
  Fix highlight color of selected text and progress bar (#4420)
  Fix two new issues
  Fix Violations of Always Use Braces (#4400)
  Delete PreferencesService.java.orig
  Add JabRef icon to installer and change watermark to JabRef (#4421)
  Checkstyle: force braces around code blocks

fix l10n parts

TODO: editing of extra info does not yet work

* upstream/master:
  Fix move to group always moves first entry (#4457)
  Add eprint cleanup (#4445)
  respect preference state (#4468)
  Set auto-update checkbox enable/disable when reading preferences (#4446)
  Improve MathSciNet fetcher and add ISBN fetcher to entry editor toolbar  (#4444)
  New translations JabRef_en.properties (German) (#4455)

Allow editing of page info directly in the table
Replace html bold with Text-Bold style

remove old dialog
fix l10n
set titles
add tooltips

* upstream/master:
  Change location of some fields in the entry editor (#4448)
  Bump applicationinsights-core from 2.2.0 to 2.2.1 (#4488)
  Added feature to add server timezone when connecting to shared database (#4483)
  Bump applicationinsights-logging-log4j2 from 2.2.0 to 2.2.1 (#4487)
  fix save button
  Update archunit from 0.9.1 -> 0.9.2

* upstream/master:
  Add docbook 5 support (#4319)
  Bump java-diff-utils from 2.2.0 to 4.0 (#4507)
  3189 fix group renaming (#4470)
  Create test (#4505)
  Bump archunit-junit5-engine from 0.9.2 to 0.9.3 (#4503)
  Bump archunit-junit5-api from 0.9.2 to 0.9.3 (#4504)
  Bump mockito-core from 2.23.0 to 2.23.4 (#4502)
  Bump guava from 27.0-jre to 27.0.1-jre (#4499)
  Improve page checker (#4498)
  Add color picker to groups dialog (#4492)
  Fix kbd XML closing tag

* upstream/master:
  Correct PNAS abbrev. (#4524)
  Create test (#4518)
  Bump junit-jupiter-params from 5.3.1 to 5.3.2 (#4514)
  Bump junit-vintage-engine from 5.3.1 to 5.3.2 (#4511)
  Bump junit-jupiter-engine from 5.3.1 to 5.3.2 (#4513)
  Bump richtextfx from 0.9.1 to 0.9.2 (#4512)
  Bump junit-jupiter-api from 5.3.1 to 5.3.2 (#4510)
  Bump junit-platform-launcher from 1.3.1 to 1.3.2 (#4515)

* upstream/master:
  Bump applicationinsights-logging-log4j2 from 2.2.1 to 2.3.0 (#4540)
  Bump antlr4-runtime from 4.7.1 to 4.7.2 (#4542)
  Bump applicationinsights-core from 2.2.1 to 2.3.0 (#4541)
  Bump antlr4 from 4.7.1 to 4.7.2 (#4543)
  Fix journal name "Astronomy Journal" to "Astronomical Journal"
  fix-for-issue-4489 (#4538)
  Sorting of read-status isn't working as expected #4521 (#4536)
  Add preselect last used export format in export to clipboard dialog (#4533)
  fixed 4365 put html in clipboard (#4519)
  [WIP] Convert Exporter Customization Dialog to javafx (#4394)
  Fixes #4437 (#4531)
  Bump checkstyle from 8.14 to 8.15 (#4528)

# Conflicts:
#	src/main/java/org/jabref/preferences/PreferencesService.java

rework future handling in detect OO installation

move gui getText to view

* upstream/master:
  Bump fontbox from 2.0.12 to 2.0.13 (#4552)
  Bump pdfbox from 2.0.12 to 2.0.13 (#4551)
  Bump wiremock from 2.19.0 to 2.20.0 (#4550)
  Fixes that renaming a group did not change the group name in the interface (#4549)

* upstream/master:
  improve styling of preferences side menu (#4556)
  Cleanup interfaces (#4553)
  Bump fontbox from 2.0.12 to 2.0.13 (#4552)
  Bump pdfbox from 2.0.12 to 2.0.13 (#4551)
  Bump wiremock from 2.19.0 to 2.20.0 (#4550)
  Fixes that renaming a group did not change the group name in the interface (#4549)

* upstream/master:
  Refactor BibEntry deprecated method (#4554)
  Added extra stats to be sent with MrDLib recommendations (#4452)

* 'ooPanel' of github.com:JabRef/jabref:
  Refactor BibEntry deprecated method (#4554)
  Added extra stats to be sent with MrDLib recommendations (#4452)
  checkstyle
  change mac default settings to LO path
  Add Book as preview as well
  fix style file select layout and inline variable'
  improve styling of preferences side menu (#4556)
  Cleanup interfaces (#4553)

* upstream/master:
  Add uncaught exception message (#4565)
  Converts integrity check dialog to JavaFX (#4559)
  Do not extract file ending from Urls (#4547)
  Bump checkstyle from 8.15 to 8.16 (#4562)
  Bump xmpbox from 2.0.12 to 2.0.13 (#4561)
  Delete the deprecated BibEntry Constructor (#4560)

# Conflicts:
#	src/main/java/org/jabref/gui/DialogService.java
#	src/main/java/org/jabref/gui/FXDialogService.java
#	src/main/java/org/jabref/gui/actions/CopyFilesAction.java
#	src/main/java/org/jabref/gui/util/CurrentThreadTaskExecutor.java

* upstream/master:
  Don't set column sort type at startup (#4577)

put visible/managed bindings in fxml

Store show/hide info of panel in preferences

* upstream/master:
  update jfoenix and gradle plugins Replace outdated transformer log4j2 with official new one
  Update journalList.txt
  Fix for Issue #4437 - Some bugs in preference->Entry table columns (#4546)

TODO: Fix execution in fx thread

Fix saving of settings after auto connect
Add notification when connections are cleared
remove custom dialog hack