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02.01 Interview Questions

Sherwin Rubio edited this page Nov 22, 2015 · 11 revisions

Sharing

  • What are your primary reasons for sharing CT scans of fossils?
  • Collaborative research landscape
  • International landscape
  • Good to have to share and archive.
  • You don't want data to be in each persons hard drive.
  • Replication is such a big aspect of science
  • Losing original data no one can confirm the findings
  • Infrastructure to hold all these CT scans
  • RAW Image Stacks Primary
  • STL Reconstructions (most important) to see anatomical structures
  • Don't want it to be public until the STL are vetted
  • How are you sharing right now, and with who?
  • Currently using Dropbox to share
  • Make available to the public
  • What is most valuable to you? 3D scans? Metadata?
  • Who would be using or accessing this tool, and what are their different roles?
  • Internal
  • Public

Searching

  • Why do you need to search CT scans of fossils?
  • Collaborative process
  • How do you search? By which category? Metadata?
  • by species name
    • which have multiple entries
    • further filtering based on institution, date
    • like digimorph
  • each folder will have 9 or 10 specimens
  • folder named (taxonomic) + Specimen Number
    • stacks of images
    • VGL files
    • STL
    • Videos of the specimen
  • What are some common problems you've faced with accessing and searching scans?
  • Inconsistent data

Organization

  • What kind of information are you uploading? *.pca file? All the tiffs?
  • What do the data requirement variables mean?
  • How are all of your files organized currently?
  • How do you see this being used in the future? Standards

Step 1: Scanning Image Stacks

  • VG Studio
  • use TIFF stack to create 3D space Step 2: Export
  • STL file Step 3:
  • How big are the files
  • 1GB-10GB (rare)