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Improve docs re chimeric/unmapped/unpaired read pairs #629

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Clarifies documentation of options for chimeric read pairs, unpaired read pairs and unmapped read pairs. See #572 for details

@TomSmithCGAT TomSmithCGAT merged commit d2acc3d into master Mar 20, 2024
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@TomSmithCGAT TomSmithCGAT deleted the ts_clarify_options_for_chimeric_unmapped_unpaired branch October 3, 2024 09:26
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