This repo contains an installable package for doing automated MRI BML segmentation. The package is built on top of the bonelab and bonelab-pytorch-lightning packages.
Callie E. Stirling, Nathan J. Neeteson, Richard E.A. Walker, Steven K. Boyd, Deep learning-based automated detection and segmentation of bone and traumatic bone marrow lesions from MRI following an acute ACL tear, Computers in Biology and Medicine, Volume 178, 2024, 108791, ISSN 0010-4825, https://doi.org/10.1016/j.compbiomed.2024.108791.
- Go to https://github.com/Bonelab/bonelab-pytorch-lightning and follow the instructions to install the
bonelabandbonelab-pytorch-lightningpackages - Clone this repository and install it.