Fixes and improvements in launch_pipeline #155
saramonzontest_modules.yml
on: pull_request
Matrix: test_all_modules
Matrix: test_map
Annotations
15 warnings
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test_all_modules (read-lab-metadata)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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test_all_modules (read-lab-metadata)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v3, actions/checkout@v3, actions/upload-artifact@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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test_all_modules (read-lab-metadata)
No files were found with the provided path: output.txt. No artifacts will be uploaded.
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test_all_modules (read-bioinfo-metadata)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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test_all_modules (read-bioinfo-metadata)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v3, actions/checkout@v3, actions/upload-artifact@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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test_all_modules (read-bioinfo-metadata)
No files were found with the provided path: output.txt. No artifacts will be uploaded.
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test_all_modules (validate)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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test_all_modules (validate)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v3, actions/checkout@v3, actions/upload-artifact@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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test_all_modules (validate)
No files were found with the provided path: output.txt. No artifacts will be uploaded.
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test_map (-d 'GISAID' -f relecov_tools/schema/gisaid_schema.json)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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test_map (-d 'GISAID' -f relecov_tools/schema/gisaid_schema.json)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v3, actions/checkout@v3, actions/upload-artifact@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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test_map (-d 'GISAID' -f relecov_tools/schema/gisaid_schema.json)
No files were found with the provided path: output.txt. No artifacts will be uploaded.
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test_map (-d 'ENA' -f relecov_tools/schema/ena_schema.json)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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test_map (-d 'ENA' -f relecov_tools/schema/ena_schema.json)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v3, actions/checkout@v3, actions/upload-artifact@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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test_map (-d 'ENA' -f relecov_tools/schema/ena_schema.json)
No files were found with the provided path: output.txt. No artifacts will be uploaded.
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