added collate_stats, v. 0.9 #37
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Singularity Build (native) | |
| on: | |
| push: | |
| # Edit the branches here if you want to change deploy behavior | |
| branches: | |
| - main | |
| - master | |
| - develop | |
| # Do the builds on all pull requests (to test them) | |
| pull_request: [] | |
| jobs: | |
| changes: | |
| name: "Changed Singularity Recipes" | |
| runs-on: ubuntu-latest | |
| outputs: | |
| changed_file: ${{ steps.files.outputs.added_modified }} | |
| steps: | |
| - id: files | |
| uses: jitterbit/get-changed-files@b17fbb00bdc0c0f63fcf166580804b4d2cdc2a42 | |
| with: | |
| format: 'json' | |
| build-test-containers: | |
| needs: | |
| - changes | |
| runs-on: ubuntu-latest | |
| strategy: | |
| # Keep going on other deployments if anything bloops | |
| fail-fast: false | |
| matrix: | |
| changed_file: ${{ fromJson(needs.changes.outputs.changed_file) }} | |
| name: Check ${{ matrix.changed_file }} | |
| steps: | |
| - name: Continue if Singularity Recipe | |
| run: | | |
| # Continue if we have a changed Singularity recipe | |
| if [[ "${{ matrix.changed_file }}" = *Singularity* ]]; then | |
| echo "keepgoing=true" >> $GITHUB_ENV | |
| fi | |
| - name: Set up Go 1.13 | |
| if: ${{ env.keepgoing == 'true' }} | |
| uses: actions/setup-go@v1 | |
| with: | |
| go-version: 1.13 | |
| id: go | |
| - name: Install Dependencies | |
| if: ${{ env.keepgoing == 'true' }} | |
| run: | | |
| sudo apt-get update && sudo apt-get install -y \ | |
| build-essential \ | |
| libssl-dev \ | |
| uuid-dev \ | |
| libgpgme11-dev \ | |
| squashfs-tools \ | |
| libseccomp-dev \ | |
| pkg-config | |
| - name: Install Singularity | |
| if: ${{ env.keepgoing == 'true' }} | |
| env: | |
| SINGULARITY_VERSION: 3.8.1 | |
| GOPATH: /tmp/go | |
| run: | | |
| mkdir -p $GOPATH | |
| sudo mkdir -p /usr/local/var/singularity/mnt && \ | |
| mkdir -p $GOPATH/src/github.com/sylabs && \ | |
| cd $GOPATH/src/github.com/sylabs && \ | |
| wget -qO- https://github.com/sylabs/singularity/releases/download/v${SINGULARITY_VERSION}/singularity-ce-${SINGULARITY_VERSION}.tar.gz | \ | |
| tar xzv && \ | |
| cd singularity-ce-${SINGULARITY_VERSION} && \ | |
| ./mconfig -p /usr/local && \ | |
| make -C builddir && \ | |
| sudo make -C builddir install | |
| - name: Check out code for the container build | |
| if: ${{ env.keepgoing == 'true' }} | |
| uses: actions/checkout@v2 | |
| - name: Build Container | |
| if: ${{ env.keepgoing == 'true' }} | |
| env: | |
| recipe: ${{ matrix.changed_file }} | |
| run: | | |
| ls | |
| if [ -f "${{ matrix.changed_file }}" ]; then | |
| sudo -E singularity build container.sif ${{ matrix.changed_file }} | |
| tag=$(echo "${recipe/Singularity\./}") | |
| if [ "$tag" == "Singularity" ]; then | |
| tag=latest | |
| fi | |
| # Build the container and name by tag | |
| echo "Tag is $tag." | |
| echo "tag=$tag" >> $GITHUB_ENV | |
| else | |
| echo "${{ matrix.changed_file }} is not found." | |
| echo "Present working directory: $PWD" | |
| ls | |
| fi | |
| - name: Login and Deploy Container | |
| if: (github.event_name != 'pull_request') | |
| env: | |
| keepgoing: ${{ env.keepgoing }} | |
| run: | | |
| if [[ "${keepgoing}" == "true" ]]; then | |
| echo ${{ secrets.GITHUB_TOKEN }} | singularity remote login -u ${{ secrets.GHCR_USERNAME }} --password-stdin oras://ghcr.io | |
| singularity push container.sif oras://ghcr.io/${GITHUB_REPOSITORY}:${tag} | |
| fi |