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Cantaloupe won't display compressed JP2 images (IA scanned book pages) #39

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ruebot opened this issue Aug 9, 2021 · 3 comments
Closed

Cantaloupe won't display compressed JP2 images (IA scanned book pages) #39

ruebot opened this issue Aug 9, 2021 · 3 comments
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ruebot commented Aug 9, 2021 

java.lang.reflect.InvocationTargetException
	at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
	at java.base/jdk.internal.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
	at java.base/jdk.internal.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
	at java.base/java.lang.reflect.Constructor.newInstance(Constructor.java:490)
	at edu.illinois.library.cantaloupe.processor.ProcessorFactory.newProcessor(ProcessorFactory.java:104)
	at edu.illinois.library.cantaloupe.resource.iiif.v2.InformationResource.doGET(InformationResource.java:138)
	at edu.illinois.library.cantaloupe.resource.HandlerServlet.handle(HandlerServlet.java:98)
	at edu.illinois.library.cantaloupe.resource.HandlerServlet.doGet(HandlerServlet.java:36)
	at javax.servlet.http.HttpServlet.service(HttpServlet.java:634)
	at javax.servlet.http.HttpServlet.service(HttpServlet.java:741)
	at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:231)
	at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)
	at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:53)
	at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:193)
	at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)
	at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:202)
	at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:96)
	at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:541)
	at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:139)
	at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:92)
	at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:688)
	at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:74)
	at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:343)
	at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:367)
	at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:65)
	at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:868)
	at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1639)
	at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49)
	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
	at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
	at java.base/java.lang.Thread.run(Thread.java:829)
Caused by: java.lang.NoClassDefFoundError: Could not initialize class edu.illinois.library.cantaloupe.processor.codec.JPEG2000KakaduImageReader
	at edu.illinois.library.cantaloupe.processor.KakaduNativeProcessor.<init>(KakaduNativeProcessor.java:129)
	... 32 more
@ruebot ruebot self-assigned this Aug 9, 2021
ruebot added a commit to yorkulibraries/ansible-role-tomcat8 that referenced this issue Aug 9, 2021
@ruebot
Add additional ReadWritePaths for gamma Tomcat service file.
56b185b 
- Partially address yorkulibraries/yudl-playbook#39
ruebot added a commit to yorkulibraries/ansible-role-tomcat8 that referenced this issue Aug 9, 2021
@ruebot
Add additional ReadWritePaths for gamma Tomcat service file.
c3bfaf3 
- Partially address yorkulibraries/yudl-playbook#39
ruebot added a commit to yorkulibraries/ansible-role-cantaloupe that referenced this issue Aug 9, 2021
@ruebot
Update cantaloupe configuration.
7053a89 
- Partially addresses yorkulibraries/yudl-playbook#39
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ruebot commented Aug 10, 2021

If we symlink grk_decompress to opj_decompress, Cantaloupe 4.1.7 will check the version on opj_decompress and add a -quiet flag as per cantaloupe-project/cantaloupe#111.

So we need to custom compile a version of Cantaloupe and comment this functionality out (cantaloupe-project/cantaloupe#296 (comment)), add a -quiet flag to Grok (uclouvain/openjpeg#928), or try and upgrade Cantaloupe to 5.0.3 (which doesn't run in Tomcat, and would require a larger look at how we'd deploy it).

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ruebot commented Aug 10, 2021

Here's the new error from the above comment:

2021-08-10 13:59:03,848 DEBUG [http-nio-8080-exec-2] e.i.l.c.r.ImageRepresentation [ImageRepresentation.java:121] write(): Unable to read the image header. (command output: PARSE ERROR: Argument: -quiet
             Couldn't find match for argument

Brief USAGE: 
   /usr/local/bin/opj_decompress  [-v] [-e <unsigned integer>] [-k
                                  <unsigned integer>] [-X] [-G <integer>]
                                  [-z <unsigned integer>] [-L <int>] [-c
                                  <unsigned int>] [-d <string>] [-p
                                  <string>] [-t <unsigned integer>] [-l
                                  <unsigned integer>] [-r <unsigned
                                  integer>] [-o <string>] [-i <string>] [-H
                                  <unsigned integer>] [-g <string>] [-s]
                                  [-u] [-f] [-O <string>] [-a <string>] [-y
                                  <string>] [--] [-version] [-h]

For complete USAGE and HELP type: 
   /usr/local/bin/opj_decompress -help

)
java.io.IOException: Unable to read the image header. (command output: PARSE ERROR: Argument: -quiet
             Couldn't find match for argument

Brief USAGE: 
   /usr/local/bin/opj_decompress  [-v] [-e <unsigned integer>] [-k
                                  <unsigned integer>] [-X] [-G <integer>]
                                  [-z <unsigned integer>] [-L <int>] [-c
                                  <unsigned int>] [-d <string>] [-p
                                  <string>] [-t <unsigned integer>] [-l
                                  <unsigned integer>] [-r <unsigned
                                  integer>] [-o <string>] [-i <string>] [-H
                                  <unsigned integer>] [-g <string>] [-s]
                                  [-u] [-f] [-O <string>] [-a <string>] [-y
                                  <string>] [--] [-version] [-h]

For complete USAGE and HELP type: 
   /usr/local/bin/opj_decompress -help

)
	at edu.illinois.library.cantaloupe.resource.ImageRepresentation.copyOrProcess(ImageRepresentation.java:159)
	at edu.illinois.library.cantaloupe.resource.ImageRepresentation.write(ImageRepresentation.java:119)
	at edu.illinois.library.cantaloupe.resource.iiif.v2.ImageResource.doGET(ImageResource.java:213)
	at edu.illinois.library.cantaloupe.resource.HandlerServlet.handle(HandlerServlet.java:98)
	at edu.illinois.library.cantaloupe.resource.HandlerServlet.doGet(HandlerServlet.java:36)
	at javax.servlet.http.HttpServlet.service(HttpServlet.java:634)
	at javax.servlet.http.HttpServlet.service(HttpServlet.java:741)
	at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:231)
	at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)
	at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:53)
	at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:193)
	at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)
	at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:202)
	at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:96)
	at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:541)
	at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:139)
	at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:92)
	at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:688)
	at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:74)
	at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:343)
	at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:367)
	at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:65)
	at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:868)
	at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1639)
	at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49)
	at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
	at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
	at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
	at java.base/java.lang.Thread.run(Thread.java:829)
Caused by: edu.illinois.library.cantaloupe.processor.ProcessorException: Unable to read the image header. (command output: PARSE ERROR: Argument: -quiet
             Couldn't find match for argument

Brief USAGE: 
   /usr/local/bin/opj_decompress  [-v] [-e <unsigned integer>] [-k
                                  <unsigned integer>] [-X] [-G <integer>]
                                  [-z <unsigned integer>] [-L <int>] [-c
                                  <unsigned int>] [-d <string>] [-p
                                  <string>] [-t <unsigned integer>] [-l
                                  <unsigned integer>] [-r <unsigned
                                  integer>] [-o <string>] [-i <string>] [-H
                                  <unsigned integer>] [-g <string>] [-s]
                                  [-u] [-f] [-O <string>] [-a <string>] [-y
                                  <string>] [--] [-version] [-h]

For complete USAGE and HELP type: 
   /usr/local/bin/opj_decompress -help

)
	at edu.illinois.library.cantaloupe.processor.OpenJpegProcessor.process(OpenJpegProcessor.java:487)
	at edu.illinois.library.cantaloupe.resource.ImageRepresentation.process(ImageRepresentation.java:190)
	at edu.illinois.library.cantaloupe.resource.ImageRepresentation.copyOrProcess(ImageRepresentation.java:157)
	... 28 common frames omitted
Caused by: javax.imageio.IIOException: Unable to read the image header.
	at java.desktop/com.sun.imageio.plugins.bmp.BMPImageReader.read(BMPImageReader.java:832)
	at java.desktop/javax.imageio.ImageReader.read(ImageReader.java:938)
	at edu.illinois.library.cantaloupe.processor.codec.AbstractIIOImageReader.read(AbstractIIOImageReader.java:340)
	at edu.illinois.library.cantaloupe.processor.OpenJpegProcessor.processInUnix(OpenJpegProcessor.java:570)
	at edu.illinois.library.cantaloupe.processor.OpenJpegProcessor.process(OpenJpegProcessor.java:471)
	... 30 common frames omitted
Caused by: java.lang.IllegalArgumentException: Invalid magic value for BMP file.
	at java.desktop/com.sun.imageio.plugins.bmp.BMPImageReader.readHeader(BMPImageReader.java:256)
	at java.desktop/com.sun.imageio.plugins.bmp.BMPImageReader.read(BMPImageReader.java:830)
	... 34 common frames omitted

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ruebot commented Aug 10, 2021

...or we can just use Kakadu from our old Djatoka setup 🤷‍♂️

ruebot added a commit to yorkulibraries/ansible-role-tomcat8 that referenced this issue Aug 10, 2021
@ruebot
Use Kakadu on gamma for Canatloupe.
e6fd072 
- yorkulibraries/yudl-playbook#39
ruebot added a commit to yorkulibraries/ansible-role-cantaloupe that referenced this issue Aug 10, 2021
@ruebot
Configuration updates for Cantaloupe 4.1.9.
a0ebfa1 
- yorkulibraries/yudl-playbook#39
ruebot added a commit to yorkulibraries/ansible-role-cantaloupe that referenced this issue Aug 10, 2021
@ruebot
Configuration updates for Cantaloupe 4.1.9.
999af7a 
- yorkulibraries/yudl-playbook#39
@ruebot ruebot closed this as completed in ef3ed44 Aug 10, 2021
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