add consensus calling option: 'most frequent bases at each pos.' #12
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| name: linux | |
| on: | |
| push: | |
| branches: [ "main" ] | |
| pull_request: | |
| branches: [ "main" ] | |
| jobs: | |
| build-linux: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Preparing Repositories | |
| uses: actions/checkout@v3 | |
| with: | |
| submodules: recursive | |
| - name: make | |
| run: make | |
| - name: Run Test Data | |
| run: ./bin/abpoa ./test_data/test.fa; \ | |
| ./bin/abpoa ./test_data/heter.fa -d2; \ | |
| ./bin/abpoa ./test_data/seq.fa -a1; \ | |
| ./bin/abpoa ./test_data/seq.fa -r5 -a1; \ | |
| ./bin/abpoa ./test_data./heter.fq -d2 -Q \ | |
| ./bin/abpoa ./test_data./heter.fq -d2 -Q -a1 |