STAAR v0.9.8

xihaoli · Feb 8, 2025 · 9db9dd5 · 9db9dd5
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,10 +1,10 @@
 Package: STAAR
 Type: Package
 Title: STAAR Procedure for Dynamic Incorporation of Multiple Functional Annotations in Whole-Genome Sequencing Studies
-Version: 0.9.7.2
-Date: 2024-11-14
-Author: Xihao Li [aut, cre], Zilin Li [aut, cre], Han Chen [aut]
-Maintainer: Xihao Li <xihaoli@unc.edu>, Zilin Li <lizl@nenu.edu.cn>
+Version: 0.9.8
+Date: 2025-02-07
+Author: Xihao Li [aut, cre], Zilin Li [aut, cre], Wenbo Wang [aut], Han Chen [aut]
+Maintainer: Xihao Li <xihaoli@unc.edu>, Zilin Li <lizl@nenu.edu.cn>, Wenbo Wang <wenbo@live.unc.edu>
 Description: An R package for performing STAAR procedure in whole-genome sequencing studies.
 License: GPL-3
 Copyright: See COPYRIGHTS for details.

diff --git a/NAMESPACE b/NAMESPACE
@@ -10,4 +10,4 @@ useDynLib(STAAR, .registration = TRUE)
 export(CCT, fit_null_glm, fit_null_glmmkin, STAAR, STAAR_cond,
        Indiv_Score_Test_Region, Indiv_Score_Test_Region_cond,
        fit_null_glm_Binary_SPA, fit_null_glmmkin_Binary_SPA,
-       STAAR_Binary_SPA)
+       STAAR_Binary_SPA, AI_STAAR)
diff --git a/R/AI_STAAR.R b/R/AI_STAAR.R
diff --git a/README.md b/README.md
@@ -40,7 +40,7 @@ Please see the <a href="docs/STAAR_manual.pdf">**STAAR** user manual</a> for det
 ## Data Availability
 The whole-genome functional annotation data assembled from a variety of sources and the precomputed annotation principal components are available at the [Functional Annotation of Variant - Online Resource (FAVOR)](https://favor.genohub.org) site and [FAVOR Essential Database](https://doi.org/10.7910/DVN/1VGTJI).
 ## Version
-The current version is 0.9.7.2 (November 14, 2024).
+The current version is 0.9.8 (February 7, 2025).
 ## Citation
 If you use **STAAR** for your work, please cite:
 

diff --git a/STAAR.Rproj b/STAAR.Rproj
@@ -1,4 +1,5 @@
 Version: 1.0
+ProjectId: a1655229-1d68-4fc7-8832-3284d26e102a
 
 RestoreWorkspace: Default
 SaveWorkspace: Default

diff --git a/docs/STAAR_manual.pdf b/docs/STAAR_manual.pdf
diff --git a/man/AI_STAAR.Rd b/man/AI_STAAR.Rd