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v0.5.0
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@wwood wwood released this 31 Aug 23:33
· 26 commits to master since this release
v0.5.0
2e8d49c
  • Overhaul the way --full-help is displayed by making it a man page, and publishing HTML versions. Add man as a dependency.
  • dereplication: Update to galah 0.2.0 (this changes dereplication results, see https://github.com/wwood/galah), and add new ways to output dereplication results and add thresholding options
  • Fix bug is genome when used with --no-zeroes that caused incorrect coverage estimates
  • Include supplementary alignments by default (can be reverted with --exclude-supplementary-alignments) (#34)
  • Croak when input BAM file is unsorted (#26)
  • genome: Add --genome-fasta-list input option

Thanks to Rhys Newell (@rhysnewell), Jianshu Zhao (@jianshu93), Atul Bhosale (@Atul9), and Antônio Pedro Camargo (@apcamargo) for contributions to this release.

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