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Update RO crate to better fit workflow profile #39

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alexhambley opened this issue Aug 5, 2024 · 0 comments
Closed

Update RO crate to better fit workflow profile #39

alexhambley opened this issue Aug 5, 2024 · 0 comments
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@alexhambley alexhambley self-assigned this Aug 5, 2024
alexhambley added a commit that referenced this issue Aug 7, 2024
@alexhambley
RO crate will now contain source files (#39)
06cf57e 
- Partially addresses #39
- Now adds source files, Dockerfile and poetry.lock
- References mainEntity
- Removed rocrate-zenodo from pip install as upload will be external to the workflow.
alexhambley added a commit that referenced this issue Aug 8, 2024
@alexhambley
Update example RO crate (#39)
7acea3a 
- Addresses #39
- RO crate now includes source files and better conforms to workflow run RO crate
- Includes mainEntity, conformsTo and references to source files
- Snakemake component now represented correctly
alexhambley added a commit that referenced this issue Aug 14, 2024
@alexhambley
create_ro_crate.py now builds an RO crate that better fits workflow r…
f2bab54 
…un profile (#39)

- Addresses #39
- create_ro_crate.py refactored and updated to create crate that includes CreateAction with relevant metadata
- Metadata added to Dockerfile
- Example RO Crate Metadata updated to reflect this
alexhambley added a commit that referenced this issue Aug 21, 2024
@alexhambley
Update authors and readme.md
8db4f9c 
- Addresses #40, #39, #38, #36
- Added newer diagram to readme.
- Removed references to ghcr, this will be added back later
- Added proper authors and orcids
- Replaced Dockerfile encodingFormat with text/plain
- Added created_files.json to RO Crate and added to data_entity["isBasedOn"].
@alexhambley alexhambley mentioned this issue Sep 11, 2024
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