Add parquet and sqlite support; add NNLS-based PEP and Q-value calcul… · wfondrie/mokapot@6b8fbfd

docs/source/vignettes/basic_python_api.ipynb:1:1: F401 `pandas` imported but unused

docs/source/vignettes/basic_python_api.ipynb:1:1: T201 `print` found

docs/source/vignettes/basic_python_api.ipynb:1:1: T201 `print` found

docs/source/vignettes/basic_python_api.ipynb:1:1: T201 `print` found

docs/source/vignettes/joint_models.ipynb:1:1: T201 `print` found

docs/source/vignettes/joint_models.ipynb:1:1: E501 Line too long (80 > 79)

docs/source/vignettes/joint_models.ipynb:1:1: E501 Line too long (80 > 79)

docs/source/vignettes/percolator_comparison.ipynb:1:1: E501 Line too long (81 > 79)

docs/source/vignettes/percolator_comparison.ipynb:1:1: T201 `print` found

docs/source/vignettes/percolator_comparison.ipynb:1:1: T201 `print` found

The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/

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