Add first draft of OpenCADD-KLIFS paper

[dominiquesydow]

Description

Draft for OpenCADD-KLIFS paper (to be submitted to JOSS).

Todos

Notable points that this PR has either accomplished or will accomplish.

• Read https://joss.readthedocs.io/en/latest/submitting.html
• Add Summary: "A summary describing the high-level functionality and purpose of the software for a diverse, non-specialist audience."
• Add Statement of Need: "A Statement of Need section that clearly illustrates the research purpose of the software."
  • Useful to facilitate KLIFS-based kinase research
  • No other KLIFS-dedicated Python packages available to our knowledge, however dynamically generated Python API via bravado
• Add OpenCADD-KLIFS TOC figure
• Check paper rendering here: https://whedon.theoj.org/
• Update OpenCADD docs
  • Add link to TeachOpenCADD T012 to OpenCADD documentation
  • Allow installation with dependencies relevant to OpenCADD-KLIFS only (Remove io __init__ imports (to enable OpenCADD-KLIFS only deps) #116) - add respective documentation

Questions

• Submitting submodules to JOSS possible? Has been done in the past - also read here.
• Name OpenCADD-KLIFS ok?
• @jaimergp are you good with being a co-author? He is :)

Status

• Ready to go

[codecov-commenter]

Codecov Report

Merging #112 (205821e) into master (ce20b50) will decrease coverage by 0.00%.
The diff coverage is n/a.

[AndreaVolkamer]

@dominiquesydow really great mini-paper!!!
Small comments in line.

[jaimergp]

Added a couple of tiny comments! It reads super well and goes straight to the point. Like the code behind! Awesome!