[Core] Subclass ModelRunner to support cross-attention & encoder sequences (towards eventual encoder/decoder model support) #17597

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Run time

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Job	Run time
yapf (3.8)	1m 39s
yapf (3.9)	1m 30s
yapf (3.10)	1m 22s
yapf (3.11)	1m 1s
yapf (3.12)	1m 5s
	6m 37s