These notebooks present hands-on tutorials for topics in modeling in Neuroscience and Systems Biology. The contents are
- Resting membrane potential Discussion of Nernst-Planck and Nernst equation and Goldman-Hodgkin-Katz equation
- Getting started with compartmental modelling in MOOSE Shows how to create a passive neuronal compartment in MOOSE
- More complex current injection protocol Shows how to generate various patterns of (current) pulses for injecting into a compartment
- Multi-compartmental neuron model Describes how you can connect several compartments to create a neuronal cable
- Cable theory Derives the cable equation and then shows its approximation using a voltage clamped multicompartmental cable