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Welcome to the ScyNet wiki!

Navigation

This wiki serves as a collection of explanations, examples and tutorials.

Setup

• Requirements & Installation

Features

• Model import
• Model reduction
• Styling & Layout options
• Contextualization with flux data

Examples

• Model of a 9 species biogas community (with FVA flux data)
• Genome-scale Model of 3 gut microbes (with AGORA models and FBA flux data)

Citing ScyNet

At the present moment we are still working on the final stages of the manuscript. Once it is made public, a citation note will be included at this place.