PCGR v2 support: Handle VAF_TUMOR and ACTIONABILITY_TIER #169
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@scwatts Would the tier re-name cause an issue with sash's rescue approach? |
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The
AF_TUMORandTIERcolumns have been renamed in PCGR v2 toVAF_TUMORandACTIONABILITY_TIER, respectively.The latter column's values also don't have a
TIERprefix any more, so handling those in the parser itself.Tested on one sample locally and it works.
Fixes #168.