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@ucscXena

ucscXena

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  1. ucsc-xena-client ucsc-xena-client Public

    Functional genomics browser

    JavaScript 59 43

  2. xenaPython xenaPython Public

    Python API for Xena Hub

    Python 53 15

  3. xena-GDC-ETL xena-GDC-ETL Public

    Extract, transform and load GDC data onto UCSC Xena

    Python 13 8

  4. wrangle wrangle Public

    data_wrangling

    Python 9 2

  5. ucsc-xena-server ucsc-xena-server Public

    Turn-key functional genomics data server.

    JavaScript 7 5

  6. kaplan-meier kaplan-meier Public

    Basic kaplan-meier methods in javascript

    JavaScript 5 3

Repositories

Showing 10 of 44 repositories
  • gitbookdocs Public

    Documentation for our gitbook

    HTML 3 4 0 0 Updated Apr 24, 2025
  • xena-web Public

    landing page

    JavaScript 0 Apache-2.0 4 1 1 Updated Apr 24, 2025
  • ucsc-xena-client Public

    Functional genomics browser

    JavaScript 59 Apache-2.0 43 113 (20 issues need help) 20 Updated Apr 24, 2025
  • cohortMetaData Public

    data cohort meta data displayed on xena cohort page; search by cohort tags

    Python 5 Apache-2.0 2 0 0 Updated Apr 21, 2025
  • ucsc-xena-server Public

    Turn-key functional genomics data server.

    JavaScript 7 Apache-2.0 5 7 (1 issue needs help) 1 Updated Feb 20, 2025
  • ucsc-xena-wasm Public

    wasm methods for UCSC xena

    C 0 Apache-2.0 0 0 0 Updated Dec 18, 2024
  • xena-GDC-ETL Public

    Extract, transform and load GDC data onto UCSC Xena

    Python 13 Apache-2.0 8 6 11 Updated Oct 14, 2024
  • Xena-GDC-auto-test Public
    Python 0 Apache-2.0 0 0 0 Updated Sep 20, 2024
  • xenaConvert Public
    Python 0 0 0 0 Updated Jul 29, 2024
  • Xena-GDC-Detect_Missing_Datasets Public

    This is testing script that checks for differences between data sets on the Xena hub and the GDC, providing the user with specific datasets that need updating.

    Python 0 Apache-2.0 0 0 0 Updated Jun 28, 2024
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