Amesos2 : Use Teuchos to gather matrix #13701

iyamazaki · 2025-01-03T18:39:50Z

@trilinos/amesos2

Motivation

This PR implements an option to gather the global matrix to MPI-0, using Teuchos MPI interface, instead of using Tpetra or Epetra doImport.

Stakeholder Feedback

Testing

Additional Information

It is called from KLU2 and ShyLUBasker for double and float

Signed-off-by: iyamazaki <iyamaza@sandia.gov>

trilinos-autotester · 2025-01-03T18:50:14Z

Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection is Not Necessary for this Pull Request.

trilinos-autotester · 2025-01-03T18:55:20Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

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trilinos-autotester · 2025-01-03T22:02:23Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs 30 Mins. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

Pull Request Auto Testing has FAILED (click to expand)

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CDash Test Results for PR# 13701.

Wiki: How to Reproduce PR Testing Builds and Errors.

Signed-off-by: iyamazaki <iyamaza@sandia.gov>

trilinos-autotester · 2025-01-04T14:10:30Z

Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection is Not Necessary for this Pull Request.

trilinos-autotester · 2025-01-04T14:15:46Z

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Using Repos:

Repo: TRILINOS (iyamazaki/Trilinos)

Pull Request Author: iyamazaki

trilinos-autotester · 2025-01-04T16:12:39Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs 30 Mins. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

Pull Request Auto Testing has FAILED (click to expand)

Build Information

Test Name: PR_gcc-openmpi-openmp

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CDash Test Results for PR# 13701.

Wiki: How to Reproduce PR Testing Builds and Errors.

…Adapter Signed-off-by: iyamazaki <iyamaza@sandia.gov>

trilinos-autotester · 2025-01-05T14:10:18Z

Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection is Not Necessary for this Pull Request.

trilinos-autotester · 2025-01-05T14:15:27Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

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Using Repos:

Repo: TRILINOS (iyamazaki/Trilinos)

Pull Request Author: iyamazaki

trilinos-autotester · 2025-01-05T15:47:04Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs 30 Mins. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

Pull Request Auto Testing has FAILED (click to expand)

Build Information

Test Name: PR_gcc-openmpi-openmp

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CDash Test Results for PR# 13701.

Wiki: How to Reproduce PR Testing Builds and Errors.

Signed-off-by: iyamazaki <ic.yamazaki@gmail.com>

trilinos-autotester · 2025-01-08T11:03:37Z

Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection is Not Necessary for this Pull Request.

trilinos-autotester · 2025-01-08T11:07:51Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

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Using Repos:

Repo: TRILINOS (iyamazaki/Trilinos)

Pull Request Author: iyamazaki

trilinos-autotester · 2025-01-08T13:52:16Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs 30 Mins. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

Pull Request Auto Testing has FAILED (click to expand)

Build Information

Test Name: PR_gcc-openmpi-openmp

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CDash Test Results for PR# 13701.

Wiki: How to Reproduce PR Testing Builds and Errors.

Signed-off-by: iyamazaki <ic.yamazaki@gmail.com>

trilinos-autotester · 2025-01-16T22:28:44Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

trilinos-autotester · 2025-01-16T23:28:41Z

All Jobs Finished; status = PASSED, However PR is now STALE, and must be retested. Set the AT: RETEST Label to force retest....

Signed-off-by: iyamazaki <iyamaza@sandia.gov>

trilinos-autotester · 2025-01-17T11:02:42Z

Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection is Not Necessary for this Pull Request.

trilinos-autotester · 2025-01-17T11:07:09Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

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Using Repos:

Repo: TRILINOS (iyamazaki/Trilinos)

Pull Request Author: iyamazaki

trilinos-autotester · 2025-01-17T14:10:56Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: all Jobs PASSED

Pull Request Auto Testing has PASSED (click to expand)

Build Information

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CDash Test Results for PR# 13701.

trilinos-autotester · 2025-01-17T14:11:13Z

Status Flag 'Pre-Merge Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
NO REVIEWS HAVE BEEN PERFORMED ON THIS PULL REQUEST!

trilinos-autotester · 2025-01-17T14:11:19Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

trilinos-autotester · 2025-01-18T14:28:35Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

trilinos-autotester · 2025-01-19T14:48:39Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

trilinos-autotester · 2025-01-20T14:48:43Z

All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

Signed-off-by: iyamazaki <iyamaza@sandia.gov>

trilinos-autotester · 2025-01-20T20:48:34Z

Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection is Not Necessary for this Pull Request.

trilinos-autotester · 2025-01-20T20:52:59Z

Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

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Using Repos:

Repo: TRILINOS (iyamazaki/Trilinos)

Pull Request Author: iyamazaki

ndellingwood

Amesos2 changes look reasonable, thanks @iyamazaki

trilinos-autotester · 2025-01-20T22:24:48Z

Status Flag 'Pull Request AutoTester' - Jenkins Testing: all Jobs PASSED

Pull Request Auto Testing has PASSED (click to expand)

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CDash Test Results for PR# 13701.

trilinos-autotester · 2025-01-20T22:25:06Z

Status Flag 'Pre-Merge Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED AND APPROVED by [ ndellingwood ]!

trilinos-autotester · 2025-01-20T22:25:13Z

Status Flag 'Pull Request AutoTester' - AutoMerge IS ENABLED, but the Label AT: AUTOMERGE is not set. Either set Label AT: AUTOMERGE or manually merge the PR...

hkthorn

The Teuchos CommHelpers change to create a gatherv specialization for float and double LGTM.

iyamazaki · 2025-01-21T02:07:17Z

Thank you, @ndellingwood & @hkthorn !!

This reverts commit 5b94adf, reversing changes made to 0678446.

This reverts commit 5b94adf, reversing changes made to 0678446. Signed-off-by: iyamazaki <iyamaza@sandia.gov>

Revert "Merge pull request #13701 from iyamazaki/amesos2-gather"

iyamazaki added 4 commits December 30, 2024 18:12

Amesos2 : matrix-gather with Tpetra backend

563b413

Signed-off-by: iyamazaki <iyamaza@sandia.gov>

Amesos2 : split gather_impl into symbolic and numeric

e2e7010

Signed-off-by: iyamazaki <iyamaza@sandia.gov>

Amesos2 : matrix-gather with Epetra backend

97d3c50

Signed-off-by: iyamazaki <iyamaza@sandia.gov>

Amesos2 : gatherv with complex type (fall back to original)

7c6c0d3

Signed-off-by: iyamazaki <iyamaza@sandia.gov>

iyamazaki added the pkg: Amesos2 label Jan 3, 2025

iyamazaki requested review from a team as code owners January 3, 2025 18:39

Amesos2 : fix compile warnings & errors (serial build)

0bdb241

Signed-off-by: iyamazaki <iyamaza@sandia.gov>

iyamazaki requested a review from a team as a code owner January 4, 2025 09:16

Amesos2 : store gathher comm pattern in SolverCore, instead of Matrix…

1792010

…Adapter Signed-off-by: iyamazaki <iyamaza@sandia.gov>

iyamazaki force-pushed the amesos2-gather branch from 6408134 to 1792010 Compare January 5, 2025 07:29

iyamazaki added the AT: WIP Causes the PR autotester to not test the PR. (Remove to allow testing to occur.) label Jan 6, 2025

Amesos2 : fix contiguous gather

d9314b0

Signed-off-by: iyamazaki <ic.yamazaki@gmail.com>

iyamazaki removed the AT: WIP Causes the PR autotester to not test the PR. (Remove to allow testing to occur.) label Jan 8, 2025

iyamazaki added the AT: WIP Causes the PR autotester to not test the PR. (Remove to allow testing to occur.) label Jan 8, 2025

Amesos2 : fix matrix-gather with CUDA build

dcec678

Signed-off-by: iyamazaki <ic.yamazaki@gmail.com>

iyamazaki removed the AT: WIP Causes the PR autotester to not test the PR. (Remove to allow testing to occur.) label Jan 10, 2025

Amesos2 : skip gathering from empty submatrix

c517a5f

Signed-off-by: iyamazaki <ic.yamazaki@gmail.com>

trilinos-autotester added the AT: STALE Added by the PR autotester if too much time has elapsed since the last successful PR test iteration label Jan 16, 2025

iyamazaki removed the AT: STALE Added by the PR autotester if too much time has elapsed since the last successful PR test iteration label Jan 17, 2025

Amesos2 : add Galeri to SimpleSolve example

d232fba

Signed-off-by: iyamazaki <iyamaza@sandia.gov>

iyamazaki force-pushed the amesos2-gather branch from 65a3e9b to d232fba Compare January 17, 2025 06:43

Amesos2 : cleanup for matrix-gather

532e81c

Signed-off-by: iyamazaki <iyamaza@sandia.gov>

iyamazaki requested a review from hkthorn January 20, 2025 21:13

ndellingwood approved these changes Jan 20, 2025

View reviewed changes

hkthorn reviewed Jan 20, 2025

View reviewed changes

iyamazaki merged commit 5b94adf into trilinos:develop Jan 21, 2025
15 of 17 checks passed

iyamazaki added a commit to iyamazaki/Trilinos that referenced this pull request Jan 21, 2025

Revert "Merge pull request trilinos#13701 from iyamazaki/amesos2-gather"

bc7d10d

This reverts commit 5b94adf, reversing changes made to 0678446.

iyamazaki mentioned this pull request Jan 21, 2025

Revert "Merge pull request #13701 from iyamazaki/amesos2-gather" #13739

Merged

iyamazaki added a commit to iyamazaki/Trilinos that referenced this pull request Jan 21, 2025

Revert "Merge pull request trilinos#13701 from iyamazaki/amesos2-gather"

c6d5b44

This reverts commit 5b94adf, reversing changes made to 0678446. Signed-off-by: iyamazaki <iyamaza@sandia.gov>

iyamazaki added a commit that referenced this pull request Jan 21, 2025

Merge pull request #13739 from iyamazaki/revert-13737

4aeca52

Revert "Merge pull request #13701 from iyamazaki/amesos2-gather"

iyamazaki mentioned this pull request Jan 22, 2025

Amesos2 : Use Teuchos to gather matrix #2 #13740

Merged

Amesos2 : Use Teuchos to gather matrix #13701

Amesos2 : Use Teuchos to gather matrix #13701

Conversation

iyamazaki commented Jan 3, 2025 • edited Loading

Motivation

Stakeholder Feedback

Testing

Additional Information

trilinos-autotester commented Jan 3, 2025

trilinos-autotester commented Jan 3, 2025

Build Information

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Using Repos:

trilinos-autotester commented Jan 3, 2025

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trilinos-autotester commented Jan 4, 2025

trilinos-autotester commented Jan 4, 2025

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Build Information

Test Name: Trilinos_PR_python3

Jenkins Parameters

Build Information

Test Name: PR_cuda

Jenkins Parameters

iyamazaki commented Jan 3, 2025 •

edited

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