Distributed Automation for XNAT

XNAT pipelines repository

A collection of CLI scripts for conveniently up/downloading and listing data on/from XNAT repositories.

XNAT-PIC consist of MRI2DICOM, a Magnetic Resonance Imaging (MRI) converter from ParaVision file format to DICOM standard and XNAT-PIC Uploader to import multimodal DICOM image datasets to XNAT.

PIXI Mice Hotel Image Splitter

Set of python scripts used to interact with XNAT mostly via the rest

DICOM small animal hotel image splitter designed to work with the PIXI plugin

🏥 XNATUM is a Python client that exposes XNAT objects and functions.

Generate email to users of the http://xnat.org software .

garjus

Command line tool for interacting with OHIF via XNAT REST.

Connects to an Xnat instance and helps in downloading scans in DICOM format, or can convert to your specified format at the destination

Backend scripts for the XNAT edf-fif-et importer plugin.

Various python automations for batch manipulation, anonymisation and editing of DICOM files, as well as working with XNAT

XNAT-PIC consist of MRI2DICOM, a Magnetic Resonance Imaging (MRI) converter from ParaVision file format to DICOM standard and XNAT-PIC Uploader to import multimodal DICOM image datasets to XNAT.

Docker Images for things to run on Xnat