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reference-free

Here are 3 public repositories matching this topic...

tobiasrausch / rdxon

Reference-free FASTQ filter for rare germline and somatic variants

sequencing cancer-genomics variant-calling k-mer pan-genome rare-disease reference-free

Updated Aug 3, 2023
C++

jfjlaros / HUMID

HUMID: reference free FastQ deduplication

clustering edit-distance umi fastq deduplication hamming-distance reference-free

Updated Dec 1, 2024
C++

gi-bielefeld / sans

Alignment-free phylogenomic splits

phylogenetic-networks phylogenomics phylogeny alignment-free k-mers splits reference-free splitstree

Updated Jan 6, 2025
C++

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