Bacterial plasmid annotation pipeline
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Mar 21, 2024 - Python
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plasmid-genomics
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A workflow for assessing similarity between a set of plasmid sequences
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Jun 16, 2023 - Nextflow
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Oct 13, 2020 - Java
Different approaches to identify best practices for detection of AMR genes, including: total genomic DNA and plasmid DNA extractions, solo assembly of Illumina short-reads and of ONT long-reads, and two hybrid assembly pipelines
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Oct 12, 2022 - Shell
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