Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)

Official Developer Documentation repository for the Biomedical Data Translator

Autonomous relay system for NCATS Biomedical Data Translator

Proof-of-concept for reasoning over the SemMedDB knowledge base, using miniKanren + heuristics + indexing.

BioThings API framework - Making high-performance API for biological annotation data

A service for finding CURIEs from lexical strings.

Babel creates cliques of equivalent identifiers across many biomedical vocabularies.

Service that produces Translator compliant nodes given a curie

Data loading pipeline for CAM database

A TRAPI-compliant component of ARAGORN that groups together similar results.

MyGene.info: A BioThings API for gene annotations

TRAPI service for BioThings Explorer

MyVariant.info: A BioThings API for human variant annotations

MyChem.info: A BioThings API for chemical/drug annotations

Intelligent APIs for a more connected web: https://smart-api.info

This repo hosts the API metadata for the Translator project

Schema and generated objects for biolink data model and upper ontology

Pydantic models for the Reasoner API data formats

Knowledge Provider Registry