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AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.
Part of Python for Scientific Computing Special Topic Trinity 2021, MSc Mathematical Modelling and Scientific Computing, University of Oxford. Experimental modification of Thomas Aynaud's package python-louvain to include spatial effects.