illumina-sequencing

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⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads

Framework to process and call somatic variation from NGS dataset generated using MSK-IMPACT assay

📦 Interleave and deinterleave FASTQ files. Streams and gzipped FASTQ files are accepted.

Automating the functionality of open-source program Minimap2

linux open-source perl genome-sequencing illumina-sequencing fastq-files minimap2 sam-files fasta-files

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