cutandtag-seq

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Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.

workflow pipeline nextflow nf-core cutandrun-seq cutandrun cutandtag-seq cutandtag

docker rna-seq ngs chip-seq atac-seq rose ngs-analysis cutandrun-seq super-enhancer cutandtag-seq

Processing, benchmarking and analysis of CUT&Tag against ENCODE ChIP-seq.

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