Multi-subject Single Cell Deconvolution
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Updated
Feb 12, 2021 - R
Multi-subject Single Cell Deconvolution
SCDC project, originally on: https://github.com/meichendong/SCDC. Support sparse matrix among other additions.
DecoFlex deconvolution method for Omic data implemented as DecoFlexR
CATD: Critical Assessment of Transcriptomics Deconvolution
This workflow performs an RNA-seq analysis from the sequencing output data to the differential expression analyses.
An R tool to detect and correct batch-effects in gene-expression data (Microarray and bulk-RNAseq))
"Applied bioinformatics" is a course for Genetics Master Program at Genetics Department
single-cell and bulk RNA-seq analyses from counts → pathways → drug candidates.
a web-based R shiny application that wraps DESeq2 R package
a fully Bayesian approach to deconvolve tumor microenvironment
Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor
integrated RNA-seq Analysis Pipeline
EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.
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