bioformats
Here are 9 public repositories matching this topic...
An end-to-end processing pipeline that transforms multi-channel whole-slide images into single-cell data.
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Jan 27, 2025 - Nextflow
A tiny utility module to parse Zeiss CZI files in Python through python-bioformats.
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Dec 9, 2021 - Python
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Jun 27, 2022 - Python
Take Olympus vsi stacks. Bleach-correct, write out ome-tiff. Save clicks.
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Jun 24, 2024 - Python
(deprecated) meta-package to import bioformats_jar from scyjava
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May 27, 2022 - Python
Image processing tools and algorithms, including OpenCV, Python Imaging Library, and custom implementations
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Jan 19, 2025 - Jupyter Notebook
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