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Remove use of dask.array.ma in PCA in favour of array API compliant f… Cubed #46: Commit 49c6b6b pushed by tomwhite
October 14, 2024 12:04 1m 59s remove-pca-masked-arrays
remove-pca-masked-arrays
October 14, 2024 12:04 1m 59s
Disable failing GPU build Cubed #45: Commit d012490 pushed by tomwhite
October 14, 2024 08:39 1m 58s disable-gpu-build
disable-gpu-build
October 14, 2024 08:39 1m 58s
Add jax.lax example Cubed #44: Commit df5f7a1 pushed by tomwhite
October 11, 2024 11:14 2m 6s numba-vs-jax
numba-vs-jax
October 11, 2024 11:14 2m 6s
Update metadata to include Python 3.12 Cubed #43: Commit 0453029 pushed by tomwhite
October 11, 2024 09:20 2m 3s python-3.12
python-3.12
October 11, 2024 09:20 2m 3s
Test on Python 3.12 - but only on NumPy 2 due to cbgen version constr… Cubed #42: Commit d442b17 pushed by tomwhite
October 11, 2024 09:01 2m 0s python-3.12
python-3.12
October 11, 2024 09:01 2m 0s
Try installing latest bio2zarr at end Cubed #41: Commit 6e87404 pushed by tomwhite
October 11, 2024 08:31 2m 8s python-3.12
python-3.12
October 11, 2024 08:31 2m 8s
Don't run pre-commit for NumPy 2 tests Cubed #40: Commit f857eff pushed by tomwhite
October 11, 2024 08:10 2m 11s python-3.12
python-3.12
October 11, 2024 08:10 2m 11s
Fix testing of wheels on Windows Cubed #39: Commit 3ee53df pushed by tomwhite
October 10, 2024 14:20 2m 5s fix-windows-wheels-test
fix-windows-wheels-test
October 10, 2024 14:20 2m 5s
Fix testing of wheels on Windows Cubed #38: Commit e774ce9 pushed by tomwhite
October 10, 2024 14:15 1m 55s fix-windows-wheels-test
fix-windows-wheels-test
October 10, 2024 14:15 1m 55s
Fix testing of wheels on Windows Cubed #37: Commit 95e90e6 pushed by tomwhite
October 10, 2024 14:13 2m 15s fix-windows-wheels-test
fix-windows-wheels-test
October 10, 2024 14:13 2m 15s
Temporarily disable some workflows while debugging Cubed #36: Commit 7819013 pushed by tomwhite
October 10, 2024 14:07 1m 57s fix-windows-wheels-test
fix-windows-wheels-test
October 10, 2024 14:07 1m 57s
Use dev version of bio2zarr for testing NumPy 2 Cubed #35: Commit 9ebc74c pushed by tomwhite
October 8, 2024 15:43 2m 8s remove-vcf
remove-vcf
October 8, 2024 15:43 2m 8s
Notebook to compare Numab and JAX acceleration in allele counting Cubed #34: Commit 134f15c pushed by tomwhite
October 7, 2024 09:06 2m 8s numba-vs-jax
numba-vs-jax
October 7, 2024 09:06 2m 8s
Update changelog Cubed #33: Commit 7f59bdb pushed by tomwhite
October 2, 2024 14:30 2m 9s remove-vcf
remove-vcf
October 2, 2024 14:30 2m 9s
Update changelog Cubed #32: Commit 107d5ff pushed by tomwhite
October 2, 2024 14:17 1m 56s remove-vcf
remove-vcf
October 2, 2024 14:17 1m 56s
Update changelog Cubed #31: Commit e80624c pushed by tomwhite
October 2, 2024 13:57 2m 3s remove-vcf
remove-vcf
October 2, 2024 13:57 2m 3s
Don't run pre-commit for NumPy 2 tests Cubed #30: Commit 094dc6c pushed by tomwhite
September 30, 2024 13:38 2m 4s python-3.12
python-3.12
September 30, 2024 13:38 2m 4s
Fix flake8 errors Cubed #29: Commit 61ef3a4 pushed by tomwhite
September 30, 2024 13:29 1m 59s python-3.12
python-3.12
September 30, 2024 13:29 1m 59s
Update flake8 Cubed #28: Commit ac2fe64 pushed by tomwhite
September 30, 2024 12:29 2m 7s python-3.12
python-3.12
September 30, 2024 12:29 2m 7s
Update flake8 Cubed #27: Commit 8f8b52e pushed by tomwhite
September 30, 2024 12:20 1m 57s python-3.12
python-3.12
September 30, 2024 12:20 1m 57s
Test on Python 3.12 - but only on NumPy 2 due to cbgen version constr… Cubed #26: Commit 41c0919 pushed by tomwhite
September 30, 2024 12:13 2m 1s python-3.12
python-3.12
September 30, 2024 12:13 2m 1s
Remove VCF docs and refer to bio2zarr and vcztools Cubed #25: Commit eeef90b pushed by tomwhite
September 24, 2024 14:15 1m 36s remove-vcf
remove-vcf
September 24, 2024 14:15 1m 36s
Test on Python 3.12 Cubed #24: Commit 21c4f6a pushed by tomwhite
September 24, 2024 10:56 1m 36s python-3.12
python-3.12
September 24, 2024 10:56 1m 36s
Use sgkit.distarray for gwas_linear_regression Cubed #23: Commit 1de068b pushed by tomwhite
September 23, 2024 12:12 1m 52s dist-array-gwas
dist-array-gwas
September 23, 2024 12:12 1m 52s
Explicitly install Zarr main branch (v2) rather than the default (v3) Cubed #22: Commit 195decc pushed by tomwhite
September 19, 2024 09:10 2m 22s upstream-build-fixes
upstream-build-fixes
September 19, 2024 09:10 2m 22s