Skip to content

Python/Qt application to run NetMHCpan 3.0 locally

Notifications You must be signed in to change notification settings

thmourikis/pyBind

Repository files navigation

Synopsis

pyBind is a Qt/python application that runs NetMHCpan-3.0 algorithm locally. Please note that pyBind is in development phase and it is not ready for full usage yet. If you want to use/test pyBind, please contact me.

Alt text

Motivation

The application was created in order to overcome the limitations that users have when run the online version NetMHCpan-3. For example, users can explore maximum 20 HLA alleles per submission in the online version of NetMHCpan-3. At the same time, downloading source code and running it via the command line is not always feasible.

Also, pyBind allows the extension of the analysis using additional binding predictions algorithms.

Installation

pyBind repository includes a compiled version of the software for Mac. Downloading this repository and double-clicking on the pyBind executable should be enough to run it in Mac. We are working towards compiling pyBind for additional platforms.

About

Python/Qt application to run NetMHCpan 3.0 locally

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages