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Refactor LISI metrics (#395)
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* improve np.nansum and use njit for HBeta

* use np.eye function for convert_to_one_hot and reduce redundant initialisation

* use with loop for temporary files

* Add importlib-metadata in setup.cfg

* set minimum python version to 3.8

* python version inas strings

* update Scanorama version

* fix n_batch
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mumichae committed Apr 17, 2024
1 parent 59ae6ee commit 443f89b
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2 changes: 1 addition & 1 deletion .github/workflows/test.yml
Original file line number Diff line number Diff line change
Expand Up @@ -73,7 +73,7 @@ jobs:
runs-on: ${{ matrix.os }}
strategy:
matrix:
r: [4.2]
r: ['4.2']
python: ['3.10']
os: [ubuntu-latest]
steps:
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