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Dev#90

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davidsebfischer merged 27 commits intomastertheislab/batchglm:masterfrom devtheislab/batchglm:devCopy head branch name to clipboardOct 31, 2019

+2,423-2,758

Commits

Commits on Sep 5, 2019

• intermediate commit

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Commits on Oct 22, 2019

• added tf2 specific unit tests

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• excluded norm and beta tests

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Commits on Oct 27, 2019

• intermediate commit

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• cosmetic changes

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• fixed small bugs, lgamma does not work yet

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  davidsebfischer

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• towards parallel evaluation of numpy code across genes

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Commits on Oct 28, 2019

• tf -> tf1

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• added tr_radius decrease for IRLS_GD_TR

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• Merge branch 'tf2_compatibility' of github.com:theislab/batchglm into tf2_compatibility

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• added newline

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• change import order in api

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• changes in api

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• implemented api for tf1 and tf2 (default:tf1)

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• add missing api.tf1.train and api.tf2.train files

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• numpy graph checks out

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• added 4 notebooks for benchmarking

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• Merge branch 'tf2_compatibility' of github.com:theislab/batchglm into tf2_compatibility

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Commits on Oct 30, 2019

• numpy based NB accuracy unit test checks out

  davidsebfischer

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• added feature-wise convergence to numpy fitting

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• Merge branch 'numpy_linalg' into tf2_compatibility

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Commits on Oct 31, 2019

• improvements to numpy fitting code and compat changes

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• fixed model api paths

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• batchglm numpy backend support functional from diffxpy

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• made tf an optional dependency

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• depreceated tutorials submodule

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• Merge pull request #89 from theislab/tf2_compatibility

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