APE 17 migration (#1674)

* remove ah submodule

* re-render setup.cfg

* remove get_package_data functions

* remove ah submodule (2)

* remove ez_setup.py

* re-render setup.py

* update pyproject.toml

* re-render .gitignore

* re-render MANIFEST.in

* add tox.ini

* re-render _astropy_init.py

* update __init__.py

* update conftest.py

* add licenses folder

* add license section to readme

* re-render docs cfg

* comment out __githash__ imports

* remove plasma setup_package.py

* disable doctests

* re apply black format

* fix author name

* add required dependency

* first round of changes to conf.py

* add jaladh changes to conf.py

* changes to doc workflows [build_docs]

* add atharva patch

* fix layout

* include package data [build_docs]

* add missing nbsphinx config

* more changes to conf.py [build_docs]

* minor changes

* add entry points

* black format script

* minor changes

* add support for CalVer :)

* comment out calver cfg

* fix typo

* minor changes

* consistent use of quotes in conf.py

* fix copyright [build_docs]

* remove obsolete .nojekyll from docs folder

* fix year in license

* add comment about missing __githash__

* [build_docs]

.github/workflows/documentation-build.yml

@@ -37,7 +37,7 @@ jobs:
 
       - name: Build Sphinx Documentation
         shell: bash -l {0}
-        run: python setup.py build_docs
+        run: cd docs/; make html
 
       - name: Deploy
         uses: peaceiris/actions-gh-pages@v3

.github/workflows/documentation-preview.yml

@@ -44,7 +44,7 @@ jobs:
 
       - name: Build documentation
         shell: bash -l {0}
-        run: python setup.py build_docs
+        run: cd docs/; make html
 
       - name: Extract branch name
         shell: bash

.gitignore

@@ -1,64 +1,48 @@
 # Compiled files
-*.py[co]
+*.py[cod]
 *.a
 *.o
 *.so
 __pycache__
 
-# Logging
-*.log
-
-
 # Ignore .c files by default to avoid including generated code. If you want to
 # add a non-generated .c extension, use `git add -f filename.c`.
 *.c
-!tardis/montecarlo/src/*.c
-
 
 # Other generated files
 */version.py
 */cython_version.py
 htmlcov
 .coverage
-.ipynb_checkpoints/
-.pytest_cache/
-
-
-# IDE Specific files
-### Pycharm IDE - Jetbrains
-.idea/*
-
-# VSCode
-.vscode/
-*.code-workspace
+MANIFEST
+.ipynb_checkpoints
 
-### PyDev IDE - Eclipse
-.metadata
-tmp/
-*.tmp
-*.bak
-local.properties
-.settings/
-.loadpath
-*.project
-*.pydevproject
+# Sphinx
+docs/api
+docs/_build
 
-### YouCompleteMe - VIM plugin
-.ycm_extra_conf.py
+# Eclipse editor project files
+.project
+.pydevproject
+.settings
 
+# Pycharm editor project files
+.idea
 
-# Sphinx
-_build
-docs/api
+# Floobits project files
+.floo
+.flooignore
 
+# Visual Studio Code project files
+.vscode
 
 # Packages/installer info
 *.egg
 *.egg-info
-.eggs/
 dist
 build
 eggs
+.eggs
 parts
 bin
 var
@@ -67,11 +51,15 @@ develop-eggs
 .installed.cfg
 distribute-*.tar.gz
 
-
 # Other
-.*.swp
+.cache
+.tox
+.*.sw[op]
 *~
-
+.project
+.pydevproject
+.settings
+pip-wheel-metadata/
 
 # Mac OSX
 .DS_Store

MANIFEST.in

@@ -1,26 +1,16 @@
 include README.rst
 include CHANGES.rst
-
-include ez_setup.py
-include ah_bootstrap.py
 include setup.cfg
+include LICENSE.rst
+include pyproject.toml
 
-recursive-include *.pyx *.c *.pxd *.h
-recursive-include tardis/montecarlo/src *.h *.c
-recursive-include tardis/io/schemas *.yml
-recursive-include tardis/data *
+recursive-include tardis *.pyx *.c *.pxd
 recursive-include docs *
 recursive-include licenses *
-recursive-include cextern *
 recursive-include scripts *
 
 prune build
 prune docs/_build
 prune docs/api
 
-recursive-include astropy_helpers *
-recursive-include astropy_helpers/astropy_helpers.egg-info *
-exclude astropy_helpers/.git
-exclude astropy_helpers/.gitignore
-
 global-exclude *.pyc *.o

README.rst

@@ -34,9 +34,6 @@ stars (*supernovae*).
     :target: https://dev.azure.com/tardis-sn/TARDIS/_build/latest?definitionId=3&repoName=tardis-sn%2Ftardis&branchName=refs%2Fpull%2F1573%2Fmerge
 
 
-
-
-
 ******************************
 Credits & Publication Policies
 ******************************
@@ -180,3 +177,14 @@ The following BibTeX entries are needed for the references:
       doi          = {10.5281/zenodo.3893940},
       url          = {https://doi.org/10.5281/zenodo.3893940}
     }
+
+
+*******
+License
+*******
+
+This project is Copyright (c) TARDIS Collaboration and licensed under
+the terms of the BSD 3-Clause license. This package is based upon
+the `Astropy package template <https://github.com/astropy/package-template>`_
+which is licensed under the BSD 3-clause license. See the licenses folder for
+more information.