Fix initial assignment overrides #1139
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If we're setting an initial value for something that has an initial assignment, delete that initial assignment first.
I think it makes the most sense to reset the model when removing an initial assignment, just like happens when you set an init() value.
This turned out to be super simple: just delete the initial assignments from the initially-generated SBML. All the values are set afterwards, an
Pull build fix from develop.
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Fix issues #1136, #1137, and #1138