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swarris / pyPaSWAS Public

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Sven Warris edited this page Feb 20, 2018 · 11 revisions

This wiki shows all the command line options and a detailed descriptions of the available programs:

Command line options
Examples
Testing of software and hardware
Docker containers
Standard aligner
PacBio long read demultiplexing
Trimmer
Additional SAM fields
Graph database connection
How to use a custom scorings matrix

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Additional SAM fields
Aligner
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Trimmer

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