Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

MRG: modify n simultaneous downloads; update buildutils #154

Merged
merged 21 commits into from
Dec 27, 2024
Merged

Conversation

bluegenes
Copy link
Collaborator

@bluegenes bluegenes commented Dec 10, 2024

This PR integrates the changes to BuildUtils (MultiSelection details, minor changes to BuildCollection filtering + writing) that arose from integration into branchwater. It also makes the number of simultaneous downloads tunable, since I was having trouble when using the 3 default permits with large eukaryotic genomes.

It also handles changes associated with zipfile handling from sourmash-bio/sourmash#3431 arising from updating sourmash core to 0.18.0

ref #134

@bluegenes bluegenes changed the title WIP: modify n simultaneous downloads; update buildutils from bw MRG: modify n simultaneous downloads; update buildutils Dec 24, 2024
@bluegenes
Copy link
Collaborator Author

ok @ctb this one is ready for review!

Copy link
Contributor

@ctb ctb left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

nice!

@bluegenes bluegenes merged commit 38d99b6 into main Dec 27, 2024
1 check passed
@bluegenes bluegenes deleted the mod-permits branch December 27, 2024 01:57
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants