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snakemake-wrappers
snakemake-wrappers PublicThis is the development home of the Snakemake wrapper repository, see
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snakemake-github-action
snakemake-github-action PublicA Github action for running a Snakemake workflow
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snakemake-workflow-catalog
snakemake-workflow-catalog PublicA statically generated catalog of available Snakemake workflows
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snakedeploy
snakedeploy Publicdeploy a snakemake pipeline directly from version control (under development)
Repositories
- snakemake-executor-plugin-slurm Public
A Snakemake executor plugin for submitting jobs to a SLURM cluster
snakemake/snakemake-executor-plugin-slurm’s past year of commit activity - snakemake-executor-plugin-azure-batch Public
A Snakemake executor plugin for submitting jobs to Microsoft Azure Batch.
snakemake/snakemake-executor-plugin-azure-batch’s past year of commit activity - snakemake-interface-storage-plugins Public
This package provides a stable interface for interactions between Snakemake and its storage plugins.
snakemake/snakemake-interface-storage-plugins’s past year of commit activity - snakemake-storage-plugin-xrootd Public
A Snakemake storage plugin for handling input and output via XRootD
snakemake/snakemake-storage-plugin-xrootd’s past year of commit activity - snakemake-executor-plugin-kubernetes Public
A snakemake executor plugin for submission of jobs to Kubernetes
snakemake/snakemake-executor-plugin-kubernetes’s past year of commit activity