Add docker

Dockerfile

@@ -0,0 +1,12 @@
+FROM ubuntu:20.04
+LABEL maintainer "Morteza Hosseini"
+
+ENV DEBIAN_FRONTEND=noninteractive
+RUN apt update && apt install -y cmake g++ wget unzip
+
+RUN wget https://github.com/smortezah/smashpp/archive/refs/heads/master.zip
+RUN unzip master.zip && rm -f master.zip
+RUN mv smashpp-master smashpp
+
+WORKDIR /smashpp
+RUN bash install.sh

README.md

@@ -6,12 +6,14 @@ A fast tool to find and visualize rearrangements in DNA sequences.
 
 To install Smash++ on various operating systems, follow the instructions below. It requires CMake (>= 3.9) and a C++14 compliant compiler. Note that a precompiled executable is available for 64 bit operating systems in the `experiment/bin` directory.
 
-### Conda
-
-Install [Miniconda](https://docs.conda.io/en/latest/miniconda.html), then run the following:
-
+### Docker
+Pull the image by
 ```bash
-conda install -c bioconda -y smashpp
+docker pull smortezah/smashpp
+```
+and run it:
+```bash
+docker run -it smortezah/smashpp
 ```
 
 ### Ubuntu
@@ -59,6 +61,14 @@ cd smashpp
 
 **Note**: in all operating systems, in the case of permission denial, you can use `sudo bash install.sh` instead of `./install.sh`.
 
+### Conda
+
+Install [Miniconda](https://docs.conda.io/en/latest/miniconda.html), then run the following:
+
+```bash
+conda install -c bioconda -y smashpp
+```
+
 ## Run
 
 ```text