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add hla3
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slowkow authored Apr 12, 2024
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Expand Up @@ -502,6 +502,14 @@ https://github.com/WansonChoi/HATK

> HATK(HLA Analysis Tool-Kit) is a collection of tools and modules to perform HLA fine-mapping analysis, which is to identify which HLA allele or amino acid position of the HLA gene is driving the disease.
## hla3: weight of evidence of HLA allele expression based on bulk TCR beta-chain repertoires

Python scripts

https://github.com/kmayerb/hla3

> This repository contains Python functions for inferring HLA-alleles from bulk TCR beta chain data using a simple weight of evidence predictor.
### HLA-LA: Fast HLA type inference from whole-genome data

C++ and Perl
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