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SIB Swiss Institute of Bioinformatics

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  1. training-collection training-collection Public

    Collection of bioinformatics training materials

    Python 980 183

  2. single-cell-training single-cell-training Public

    SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    R 78 37

  3. intermediate-python-training intermediate-python-training Public

    Jupyter Notebook 60 25

  4. first-steps-with-python-training first-steps-with-python-training Public

    repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training

    Jupyter Notebook 54 15

  5. first-steps-with-R-training first-steps-with-R-training Public

    repository of the 2-day course "First steps with R in Life Sciences" from SIB-training

    R 42 12

  6. intro-machine-learning-training intro-machine-learning-training Public

    Jupyter Notebook 37 15

Repositories

Showing 10 of 119 repositories
  • sparql-llm Public

    🦜✨ Chat system and reusable components to improve LLMs capabilities when generating SPARQL queries

    sib-swiss/sparql-llm’s past year of commit activity
    Jupyter Notebook 6 MIT 0 1 0 Updated Nov 7, 2024
  • pytorch-practical-training Public

    pratrical crash course on pytorch by reproducing some published biology-related deep-learning models

    sib-swiss/pytorch-practical-training’s past year of commit activity
    Jupyter Notebook 13 CC-BY-4.0 4 0 0 Updated Nov 7, 2024
  • epinorm Public

    Scripts for processing of disease outbreak records as part of the MOOD project.

    sib-swiss/epinorm’s past year of commit activity
    Python 2 0 1 0 Updated Nov 6, 2024
  • sib-swiss/intermediate-python-training’s past year of commit activity
    Jupyter Notebook 60 CC-BY-4.0 25 4 1 Updated Nov 5, 2024
  • sparql-training Public

    This repository contains training material for querying SIB (Swiss Institute of Bioinformatics) resources with SPARQL.

    sib-swiss/sparql-training’s past year of commit activity
    Jupyter Notebook 8 4 0 0 Updated Nov 4, 2024
  • training-collection Public

    Collection of bioinformatics training materials

    sib-swiss/training-collection’s past year of commit activity
    Python 980 183 1 0 Updated Nov 3, 2024
  • sib-swiss/single-cell-python-training’s past year of commit activity
    HTML 1 CC-BY-4.0 0 0 0 Updated Nov 3, 2024
  • sib-swiss/spatial-transcriptomics-training’s past year of commit activity
    R 2 CC-BY-4.0 1 1 0 Updated Nov 3, 2024
  • glittr-stats Public

    General statistics of Glittr.org. Comes with the manuscript.

    sib-swiss/glittr-stats’s past year of commit activity
    PostScript 0 0 0 0 Updated Nov 3, 2024
  • sparql-examples Public

    A set of SPARQL examples that are used in different SIB resources

    sib-swiss/sparql-examples’s past year of commit activity

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