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sequana / variant_calling Public

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Releases: sequana/variant_calling

Releases · sequana/variant_calling

v1.2.0

31 Jan 08:45

cokelaer

This commit was created on GitHub.com and signed with GitHub’s verified signature.

GPG key ID: B5690EEEBB952194

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v1.2.0 Latest

Latest

What's Changed

Add missing resources section in snpeff rule by @khourhin in #24
add minimap2 by @cokelaer in #25

Full Changelog: v1.1.2...v1.2.0

Contributors

cokelaer and khourhin

Assets 2

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v1.1.2

11 Jan 15:11

cokelaer

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GPG key ID: 4AEE18F83AFDEB23

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v1.1.2

Fix regression joint calling

Assets 2

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v1.1.1

05 Dec 12:13

cokelaer

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GPG key ID: 4AEE18F83AFDEB23

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v1.1.1

What's Changed

Fix coverage (regression) and add a test by @cokelaer in #22

Full Changelog: v1.1.0...v1.1.1

Contributors

cokelaer

Assets 2

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v1.1.0

05 Dec 09:25

cokelaer

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GPG key ID: 4AEE18F83AFDEB23

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v1.1.0

What's Changed

Set sequana_coverage to False by default (to follow docstring) by @khourhin in #18
Update to use latest sequana_pipetools (click) by @cokelaer in #19
update CI pypi by @cokelaer in #20
Fix wrapper tag and --from-project minimal call by @cokelaer in #21

New Contributors

@khourhin made their first contribution in #18

Full Changelog: v1.02...v1.1.0

Contributors

cokelaer and khourhin

Assets 2

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v1.0.2

10 Oct 08:55

cokelaer

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GPG key ID: 4AEE18F83AFDEB23

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v1.0.2

What's Changed

Fix multiqc, add genomecov by @cokelaer in #17

Full Changelog: v1.0.1...v1.02

Contributors

cokelaer

Assets 2

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v1.0.1

07 Jul 11:40

cokelaer

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GPG key ID: 4AEE18F83AFDEB23

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v1.0.1

What's Changed

automatically set the index algorithm by @cokelaer in #15

Full Changelog: v1.0.0...v1.0.1

Contributors

cokelaer

Assets 2

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v1.0.0

24 May 07:43

cokelaer

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v1.0.0

What's Changed

Update CI by @cokelaer in #12
Use latest apptainers for graphviz and fix snpeff by @cokelaer in #13

Full Changelog: v0.12.0...v1.0.0

Contributors

cokelaer

Assets 2

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v0.12.0

24 Nov 21:10

cokelaer

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v0.12.0

What's Changed

update picard by @cokelaer in #9
add new workflow to test singularity by @cokelaer in #10
update apptainers and add vcf to bcf by @cokelaer in #11

Full Changelog: v0.11.0...v0.12.0

Contributors

cokelaer

Assets 2

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v0.11.0

31 Aug 06:28

cokelaer

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v0.11.0

What's Changed

add singularity by @cokelaer in #7

Full Changelog: v0.10.0...v0.11.0

Contributors

cokelaer

Assets 2

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v0.10.0

11 Mar 16:09

cokelaer

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v0.10.0

First stable release

Assets 2

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