Update Project.toml #536
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: ['*'] | |
| pull_request: | |
| concurrency: | |
| # Skip intermediate builds: always. | |
| # Cancel intermediate builds: only if it is a pull request build. | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: ${{ startsWith(github.ref, 'refs/pull/') }} | |
| jobs: | |
| test: | |
| name: Julia ${{ matrix.version }} - ${{ matrix.os }} - ${{ matrix.arch }} - ${{ github.event_name }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| version: | |
| - '1.10' | |
| - '1.11' | |
| python: [3.10.13] | |
| os: | |
| - ubuntu-latest | |
| arch: | |
| - x64 | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| - name: Set ENV Variables for Python | |
| run: echo ENV["PYTHON"] = "${{ env.pythonLocation }}/bin/python" >> $GITHUB_ENV | |
| - name: Install Python dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install fides petab-select==0.1.10 | |
| - uses: julia-actions/setup-julia@v1 | |
| with: | |
| version: ${{ matrix.version }} | |
| arch: ${{ matrix.arch }} | |
| - uses: julia-actions/cache@v1 | |
| - uses: julia-actions/julia-buildpkg@v1 | |
| env: | |
| PYTHON : "${{ env.pythonLocation }}/bin/python" | |
| - uses: julia-actions/julia-runtest@v1 | |
| continue-on-error: ${{ matrix.version == 'nightly' }} | |
| - uses: julia-actions/julia-processcoverage@v1 | |
| - uses: codecov/codecov-action@v4 | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | |
| docs: | |
| name: Documentation | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: write | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: julia-actions/setup-julia@v1 | |
| with: | |
| version: '1' | |
| - uses: julia-actions/julia-buildpkg@v1 | |
| - uses: julia-actions/julia-docdeploy@v1 | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| - run: | | |
| julia --project=docs -e ' | |
| using Documenter: DocMeta, doctest | |
| using PEtab | |
| DocMeta.setdocmeta!(PEtab, :DocTestSetup, :(using PEtab); recursive=true) | |
| doctest(PEtab)' |