applicativesystem

Finished writing the code today and a complete graph to bed analyzer and final and binary release.
sciencegenome · Jan 14, 2025 · 0af041a · 0af041a
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diff --git a/Cargo.lock b/Cargo.lock
diff --git a/Cargo.toml b/Cargo.toml
@@ -0,0 +1,7 @@
+[package]
+name = "rust-pangenome-graph-bed"
+version = "0.1.0"
+edition = "2021"
+
+[dependencies]
+clap = { version = "4.5.26", features = ["derive"] }
diff --git a/README.md b/README.md
@@ -1,2 +1,38 @@
 # rust-pangenome-graph-bed
-rust pangenome graph bed
+
+ - rust pangenome graph bed converted
+ - Incase of Golang and RUST, please see the last commit message and if it says compiled binary then it is completed or else still in development version.
+
+
+ ```
+ cargo build 
+
+ ```
+
+ ```
+ ╭─gauravsablok@fedora ~/Desktop/rust-pangenome-graph-linear  ‹main*› 
+ ╰─➤  ./target/debug/rust-pangenome-graph-bed -h
+ Usage: rust-pangenome-graph-bed <GRAPH>
+
+ Arguments:
+  <GRAPH>  please provide the path to the graph file
+
+ Options:
+  -h, --help     Print help
+  -V, --version  Print version  
+ 
+ ```
+
+ ```
+ ./target/debug/rust-pangenome-graph-bed ./sample-file/sample-pangenome.gfa
+ "MT_human"	0	4001	"MTh0"	0
+ "MT_human"	4001	4502	"MTh4001"	0
+ "MT_orang"	3426	3927	"MTo3426"	1
+ "MT_human"	4502	9505	"MTh4502"	0
+ "MT_orang"	8961	9463	"MTo8961"	1
+ "MT_human"	9505	13014	"MTh9505"	0
+ "MT_human"	13014	13516	"MTh13014"	0
+ "MT_human"	13516	16569	"MTh13516"	0
+ ```
+
+ Gaurav Sablok
diff --git a/rust-pangenome-graph-bed b/rust-pangenome-graph-bed
diff --git a/rust-pangenome-graph-bed.tar b/rust-pangenome-graph-bed.tar
diff --git a/sample-file/gfa-bed.txt b/sample-file/gfa-bed.txt
@@ -0,0 +1,8 @@
+MT_human	0	4001	MTh0	0
+MT_human	4001	4502	MTh4001	0
+MT_orang	3426	3927	MTo3426	1
+MT_human	4502	9505	MTh4502	0
+MT_orang	8961	9463	MTo8961	1
+MT_human	9505	13014	MTh9505	0
+MT_human	13014	13516	MTh13014	0
+MT_human	13516	16569	MTh13516	0