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Betabarrel added missing configuration #633

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merged 4 commits into from
Sep 16, 2022
Merged

Betabarrel added missing configuration #633

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583d425
Betabarrel added missing configuration
scimerman Sep 15, 2022
c3086e3
Merge branch 'develop' into bb
pneerincx Sep 16, 2022
53f4165
Update group_vars/betabarrel_cluster/vars.yml
scimerman Sep 16, 2022
83fe88b
betabarrel: path fix
scimerman Sep 16, 2022
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117 changes: 79 additions & 38 deletions group_vars/betabarrel_cluster/vars.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -105,58 +105,75 @@ data_transfer_only_group: 'umcg-sftp-only'
envsync_user: 'umcg-envsync'
envsync_group: 'umcg-depad'
functional_admin_group: 'umcg-funad'
functional_users_group: 'umcg-funus' # For all functional accounts. Used in /etc/security/access.conf.
hpc_env_prefix: '/apps'
regular_groups:
- "{{ envsync_group }}"
- "{{ functional_admin_group }}"
- "{{ functional_users_group }}"
- 'umcg-atd'
- 'umcg-gap'
- 'umcg-gd'
- 'umcg-genomescan'
- 'umcg-gsad'
- 'umcg-gst'
- 'umcg-lab'
- 'umcg-labgnkbh'
- 'umcg-patho'
- 'umcg-vipt'
regular_users:
- user: "{{ envsync_user }}"
groups: ["{{ envsync_group }}"]
groups: ["{{ envsync_group }}", "{{ functional_users_group }}"]
- user: 'umcg-atd-ateambot'
groups: ['umcg-atd']
groups: ['umcg-atd', 'umcg-gsad', "{{ functional_users_group }}"]
sudoers: '%umcg-atd'
- user: 'umcg-atd-dm'
groups: ['umcg-atd']
groups: ['umcg-atd', "{{ functional_users_group }}"]
sudoers: '%umcg-atd'
- user: 'umcg-gap-ateambot'
groups: ['umcg-gap']
groups: ['umcg-gap', "{{ functional_users_group }}"]
sudoers: '%umcg-gap'
- user: 'umcg-gap-dm'
groups: ['umcg-gap']
groups: ['umcg-gap', "{{ functional_users_group }}"]
sudoers: '%umcg-gap'
- user: 'umcg-gd-ateambot'
groups: ['umcg-gd']
groups: ['umcg-gd', 'umcg-gap', "{{ functional_users_group }}"]
sudoers: '%umcg-gd'
- user: 'umcg-gd-dm'
groups: ['umcg-gd']
groups: ['umcg-gd', "{{ functional_users_group }}"]
sudoers: '%umcg-gd'
- user: 'umcg-genomescan-ateambot'
groups: ['umcg-genomescan']
groups: ['umcg-genomescan', "{{ functional_users_group }}"]
sudoers: '%umcg-genomescan'
- user: 'umcg-genomescan-dm'
groups: ['umcg-genomescan']
groups: ['umcg-genomescan', "{{ functional_users_group }}"]
sudoers: '%umcg-genomescan'
- user: 'umcg-gsad-ateambot'
groups: ['umcg-gsad']
groups: ['umcg-gsad', "{{ functional_users_group }}"]
sudoers: '%umcg-gsad'
- user: 'umcg-gsad-dm'
groups: ['umcg-gsad']
groups: ['umcg-gsad', "{{ functional_users_group }}"]
sudoers: '%umcg-gsad'
- user: 'umcg-gst-ateambot'
groups: ['umcg-gst']
groups: ['umcg-gst', "{{ functional_users_group }}"]
sudoers: '%umcg-gst'
- user: 'umcg-gst-dm'
groups: ['umcg-gst']
groups: ['umcg-gst', "{{ functional_users_group }}"]
sudoers: '%umcg-gst'
- user: 'umcg-labgnkbh-ateambot'
groups: ['umcg-labgnkbh', "{{ functional_users_group }}"]
sudoers: '%umcg-labgnkbh'
- user: 'umcg-labgnkbh-dm'
groups: ['umcg-labgnkbh', "{{ functional_users_group }}"]
sudoers: '%umcg-labgnkbh'
- user: 'umcg-patho-ateambot'
groups: ['umcg-patho', "{{ functional_users_group }}"]
sudoers: '%umcg-patho'
- user: 'umcg-patho-dm'
groups: ['umcg-patho', "{{ functional_users_group }}"]
sudoers: '%umcg-patho'
- user: 'umcg-vipt-dm'
groups: ['umcg-vipt']
groups: ['umcg-vipt', "{{ functional_users_group }}"]
sudoers: '%umcg-vipt'
#
# Shared storage related variables
Expand Down Expand Up @@ -200,73 +217,97 @@ lfs_mounts:
- name: umcg-genomescan
- name: umcg-gsad
- name: umcg-gst
- name: umcg-lab
mode: '2750'
- name: umcg-vipt
rw_machines: "{{ groups['user_interface'] + groups['compute_vm'] }}"
- lfs: prm05
pfs: 'medgen_zincfinger$'
groups:
- name: umcg-atd
- name: umcg-gap
- name: umcg-gd
#- name: umcg-gap Do not use production groups while still in development phase.
#- name: umcg-gd Do not use production groups while still in development phase.
- name: umcg-gsad
- name: umcg-gst
- name: umcg-vipt
#- name: umcg-vipt Do not use production groups while still in development phase.
rw_machines: "{{ groups['chaperone'] }}"
- lfs: dat05
pfs: 'medgen_zincfinger$'
groups:
- name: umcg-atd
- name: umcg-gap
- name: umcg-gd
- name: umcg-genomescan
#- name: umcg-gap Do not use production groups while still in development phase.
#- name: umcg-gd Do not use production groups while still in development phase.
#- name: umcg-genomescan Do not use production groups while still in development phase.
- name: umcg-gsad
- name: umcg-gst
- name: umcg-vipt
#- name: umcg-vipt Do not use production groups while still in development phase.
rw_machines: "{{ groups['chaperone'] }}"
- lfs: prm06
pfs: 'medgen_leucinezipper$'
groups:
- name: umcg-atd
- name: umcg-gap
- name: umcg-gd
#- name: umcg-gap Do not use production groups while still in development phase.
#- name: umcg-gd Do not use production groups while still in development phase.
- name: umcg-gsad
- name: umcg-gst
- name: umcg-vipt
#- name: umcg-vipt Do not use production groups while still in development phase.
rw_machines: "{{ groups['chaperone'] }}"
- lfs: dat06
pfs: 'medgen_leucinezipper$'
groups:
- name: umcg-atd
- name: umcg-gap
- name: umcg-gd
- name: umcg-genomescan
#- name: umcg-gap Do not use production groups while still in development phase.
#- name: umcg-gd Do not use production groups while still in development phase.
#- name: umcg-genomescan Do not use production groups while still in development phase.
- name: umcg-gsad
- name: umcg-gst
- name: umcg-vipt
#- name: umcg-vipt Do not use production groups while still in development phase.
rw_machines: "{{ groups['chaperone'] }}"
- lfs: prm07
pfs: 'medgen_wingedhelix$'
groups:
- name: umcg-atd
- name: umcg-gap
- name: umcg-gd
#- name: umcg-gap Do not use production groups while still in development phase.
#- name: umcg-gd Do not use production groups while still in development phase.
- name: umcg-gsad
- name: umcg-gst
- name: umcg-vipt
#- name: umcg-vipt Do not use production groups while still in development phase.
rw_machines: "{{ groups['chaperone'] }}"
- lfs: dat07
pfs: 'medgen_wingedhelix$'
groups:
- name: umcg-atd
- name: umcg-gap
- name: umcg-gd
- name: umcg-genomescan
#- name: umcg-gap Do not use production groups while still in development phase.
#- name: umcg-gd Do not use production groups while still in development phase.
#- name: umcg-genomescan Do not use production groups while still in development phase.
- name: umcg-gsad
- name: umcg-gst
- name: umcg-vipt
#- name: umcg-vipt Do not use production groups while still in development phase.
rw_machines: "{{ groups['chaperone'] }}"
- lfs: env05
pfs: local_raid
ro_machines: "{{ groups['compute_vm'] + groups['user_interface'] }}"
rw_machines: "{{ groups['deploy_admin_interface'] }}"
smb_server_users:
- name: sbsuser
uid: 501
groups:
- name: umcg-lab
gid: 55100194
- name: illumina
uid: 502
groups:
- name: umcg-gap
gid: 55100225
smb_server_interfaces: 192.168.1.0/24 # in addition to 127.0.0.1, which must always be present.
smb_server_shares:
- name: ngs
comment: Share for sequencers
path: /mnt/local_raid/groups/umcg-lab/tmp05/sequencers
users: sbsuser
file_mode: 0640
dir_mode: 0750
- name: array
comment: Share for array scanners
path: /mnt/local_raid/groups/umcg-gap/tmp05/rawdata/array/IDAT/
users: illumina
file_mode: 0660
dir_mode: 0770
...