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Prepare for release
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robomics committed Apr 3, 2023
1 parent d750ce3 commit 317d874
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6 changes: 3 additions & 3 deletions README.md
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Expand Up @@ -137,11 +137,11 @@ user@dev:/tmp$ nextflow run --max_cpus=8 \
--assembly_gaps=data/gaps.txt.gz \
--outdir=data/results/ \
https://github.com/robomics/call_tad_cliques \
-r v0.3.0 \
-r v0.3.1 \
-with-singularity # Replace this with -with-docker to use Docker instead

N E X T F L O W ~ version 22.10.7
Launching `https://github.com/robomics/call_tad_cliques` [focused_bohr] DSL2 - revision: 9a02af259a [v0.3.0]
Launching `https://github.com/robomics/call_tad_cliques` [focused_bohr] DSL2 - revision: 9a02af259a [v0.3.1]
executor > local (16)
[71/d00e78] process > check_sample_sheet [100%] 1 of 1 ✔
[ad/a7b3ba] process > process_sample_sheet [100%] 1 of 1 ✔
Expand Down Expand Up @@ -197,7 +197,7 @@ If you get permission errors when using `-with-docker`:

If you get an error similar to:
```
Cannot find revision `v0.3.0` -- Make sure that it exists in the remote repository `https://github.com/robomics/call_tad_cliques`
Cannot find revision `v0.3.1` -- Make sure that it exists in the remote repository `https://github.com/robomics/call_tad_cliques`
```

try to remove folder `~/.nextflow/assets/robomics/call_tad_cliques` before running the workflow
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2 changes: 1 addition & 1 deletion nextflow.config
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Expand Up @@ -24,7 +24,7 @@ params {
}

process {
container = 'ghcr.io/robomics/call_tad_cliques:main'
container = 'ghcr.io/robomics/call_tad_cliques:0.3.1'
}

includeConfig 'config/base.config'
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